RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 MRPL2Q5T653 305 aaKnown RBP2.35□□□□□ -2.03
CCDC58-204ENST00000479414 AMMECR1LQ6DCA0 310 aa2.35□□□□□ -2.03
CCDC58-204ENST00000479414 LINC00596Q86U02 117 aa2.35□□□□□ -2.03
CCDC58-204ENST00000479414 MUC7Q8TAX7 377 aa2.35□□□□□ -2.03
CCDC58-204ENST00000479414 UBA3Q8TBC4 463 aa2.35□□□□□ -2.03
CCDC58-204ENST00000479414 ACTL9Q8TC94 416 aa2.35□□□□□ -2.03
CCDC58-204ENST00000479414 IGF2BP2-AS1Q96M15 143 aa2.35□□□□□ -2.03
CCDC58-204ENST00000479414 ZNF436Q9C0F3 470 aaPredicted RBP2.35□□□□□ -2.03
CCDC58-204ENST00000479414 ACOT13Q9NPJ3 140 aa2.35□□□□□ -2.03
CCDC58-204ENST00000479414 TNIKQ9UKE5 1360 aa2.35□□□□□ -2.03
CCDC58-204ENST00000479414 AQRO60306 1485 aaKnown RBP eCLIP2.34□□□□□ -2.03
CCDC58-204ENST00000479414 OR2AT4A6NND4 320 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 C9JQL5 133 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 K7EPK0 472 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 ZNF593O00488 134 aaPredicted RBP2.34□□□□□ -2.03
CCDC58-204ENST00000479414 FFAR1O14842 300 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 GATCO43716 136 aaKnown RBP2.34□□□□□ -2.03
CCDC58-204ENST00000479414 CPSF4O95639 269 aaKnown RBP2.34□□□□□ -2.03
CCDC58-204ENST00000479414 CD8AP01732 235 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 SNRPAP09012 282 aaKnown RBP2.34□□□□□ -2.03
CCDC58-204ENST00000479414 CGB3P0DN86 165 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 CGB7P0DN87 165 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 GPR4P46093 362 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 SLC18A1P54219 525 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 GUSBP1Q15486 140 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 ZNF141Q15928 474 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 Q499Y3 187 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 PID1Q7Z2X4 250 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 ZFP82Q8N141 532 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 SYS1Q8N2H4 156 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 MITD1Q8WV92 249 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 CCL17Q92583 94 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 YIPF5Q969M3 257 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 FMC1Q96HJ9 113 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 RILPQ96NA2 401 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 DUSP21Q9H596 190 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 POMKQ9H5K3 350 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 TAC3Q9UHF0 121 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 ACOT9Q9Y305 439 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 ICOSQ9Y6W8 199 aa2.34□□□□□ -2.03
CCDC58-204ENST00000479414 RBFOX3A6NFN3 312 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 VAPBO95292 243 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 IGKV1D-33P01593 117 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 IGKV1-33P01594 117 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 PRPS1L1P21108 318 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 IMPA1P29218 277 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 FOXA1P55317 472 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 BIKQ13323 160 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 ENDOGQ14249 297 aaKnown RBP2.33□□□□□ -2.04
CCDC58-204ENST00000479414 ACTL10Q5JWF8 245 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 USP50Q70EL3 339 aaPredicted RBP2.33□□□□□ -2.04
CCDC58-204ENST00000479414 MARCH3Q86UD3 253 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 FAM58AQ8N1B3 248 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 OR52K1Q8NGK4 314 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 CLHC1Q8NHS4 586 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 LRRC39Q96DD0 335 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 PRORYQ9H606 182 aa2.33□□□□□ -2.04
CCDC58-204ENST00000479414 NACADO15069 1562 aa2.32□□□□□ -2.04
CCDC58-204ENST00000479414 A0A1B0GXF2 115 aa2.32□□□□□ -2.04
CCDC58-204ENST00000479414 ZNF729A6NN14 1252 aaPredicted RBP2.32□□□□□ -2.04
CCDC58-204ENST00000479414 A8MWP4 228 aa2.32□□□□□ -2.04
CCDC58-204ENST00000479414 GYG2O15488 501 aa2.32□□□□□ -2.04
CCDC58-204ENST00000479414 ACTBL2Q562R1 376 aa2.32□□□□□ -2.04
CCDC58-204ENST00000479414 IDNKQ5T6J7 187 aa2.32□□□□□ -2.04
CCDC58-204ENST00000479414 OR6N2Q8NGY6 317 aa2.32□□□□□ -2.04
CCDC58-204ENST00000479414 SDHAF2Q9NX18 166 aa2.32□□□□□ -2.04
CCDC58-204ENST00000479414 BZW2Q9Y6E2 419 aaKnown RBP2.32□□□□□ -2.04
CCDC58-204ENST00000479414 IGHV3-43A0A0B4J1X8 118 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 GSTTP1A0A1W2PQM5 241 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 IGKV5-2P06315 115 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 ARR3P36575 388 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 C2orf80Q0P641 193 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 GPR176Q14439 515 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 FAHD1Q6P587 224 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 ZNF773Q6PK81 442 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 TPGS1Q6ZTW0 290 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 AMN1Q8IY45 258 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 LY6G5BQ8NDX9 201 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 C2orf15Q8WU43 125 aaKnown RBP2.31□□□□□ -2.04
CCDC58-204ENST00000479414 ZNF75AQ96N20 296 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 ZNF396Q96N95 335 aaPredicted RBP2.31□□□□□ -2.04
CCDC58-204ENST00000479414 OR2M4Q96R27 311 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 HINT2Q9BX68 163 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 SYT4Q9H2B2 425 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 TXNIPQ9H3M7 391 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 RBMX2Q9Y388 322 aaKnown RBP2.31□□□□□ -2.04
CCDC58-204ENST00000479414 ZBED9Q6R2W3 1325 aa2.31□□□□□ -2.04
CCDC58-204ENST00000479414 IGLV10-54A0A075B6I4 117 aa2.3□□□□□ -2.04
CCDC58-204ENST00000479414 A0A0B4J2C4 111 aa2.3□□□□□ -2.04
CCDC58-204ENST00000479414 COX7A2P2O60397 106 aa2.3□□□□□ -2.04
CCDC58-204ENST00000479414 TNFRSF9Q07011 255 aa2.3□□□□□ -2.04
CCDC58-204ENST00000479414 STK38Q15208 465 aa2.3□□□□□ -2.04
CCDC58-204ENST00000479414 TNXAQ16473 311 aa2.3□□□□□ -2.04
CCDC58-204ENST00000479414 GALNT10Q86SR1 603 aa2.3□□□□□ -2.04
CCDC58-204ENST00000479414 MAL2Q969L2 176 aa2.3□□□□□ -2.04
CCDC58-204ENST00000479414 SDHAF3Q9NRP4 125 aa2.3□□□□□ -2.04
CCDC58-204ENST00000479414 RMND1Q9NWS8 449 aa2.3□□□□□ -2.04
CCDC58-204ENST00000479414 ZNF780BQ9Y6R6 833 aa2.3□□□□□ -2.04
CCDC58-204ENST00000479414 MYO16Q9Y6X6 1858 aa2.29□□□□□ -2.04
CCDC58-204ENST00000479414 SSH2Q76I76 1423 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms