RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 OR5T2Q8NGG2 359 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 OR11L1Q8NGX0 322 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 ANGPTL6Q8NI99 470 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 LURAP1Q96LR2 239 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 GSX2Q9BZM3 304 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 CXorf56Q9H5V9 222 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 RHOFQ9HBH0 211 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 RCC2Q9P258 522 aaKnown RBP10.96□□□□□ -0.65
CHD3-210ENST00000479080 NLKQ9UBE8 527 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 ELF5Q9UKW6 265 aaPredicted RBP10.96□□□□□ -0.65
CHD3-210ENST00000479080 ST3GAL6Q9Y274 331 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 KCNK7Q9Y2U2 307 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 WIPI2Q9Y4P8 454 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 CENPEQ02224 2701 aa10.96□□□□□ -0.66
CHD3-210ENST00000479080 DYSFO75923 2080 aa10.96□□□□□ -0.66
CHD3-210ENST00000479080 TRAV24A0A0B4J272 114 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 TMEM82A0PJX8 343 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 OOEPA6NGQ2 149 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 LGALS8O00214 317 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 CYB5AP00167 134 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 KNG1P01042 644 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 CSTBP04080 98 aaKnown RBP10.95□□□□□ -0.66
CHD3-210ENST00000479080 PTHLHP12272 177 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 CHATP28329 748 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 VEGFCP49767 419 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 CAPZA1P52907 286 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 ART1P52961 327 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 GPR176Q14439 515 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 AVPI1Q5T686 147 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 OLFML2AQ68BL7 652 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 LYPD2Q6UXB3 125 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 Q6ZPA2 131 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 FGFRL1Q8N441 504 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 DEFB108BQ8NET1 73 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 GCDHQ92947 438 aaPredicted RBP10.95□□□□□ -0.66
CHD3-210ENST00000479080 PERPQ96FX8 193 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 CMTM3Q96MX0 182 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 GAFA1Q96PS6 74 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 S100A13Q99584 98 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 TMEM165Q9HC07 324 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 AKIP1Q9NQ31 210 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 RASL12Q9NYN1 266 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 CTSZQ9UBR2 303 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 PEX16Q9Y5Y5 336 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 NPTNQ9Y639 398 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 ABCA12Q86UK0 2595 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 AKAP9Q99996 3911 aa10.95□□□□□ -0.66
CHD3-210ENST00000479080 POLQO75417 2590 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 PPIAL4EA0A075B759 164 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 RFPL4AA6NLU0 287 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 OR2AT4A6NND4 320 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 PPIAL4DF5H284 164 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 RFPL4AL1F8VTS6 287 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 IFNL4K9M1U5 179 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 MFNGO00587 321 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 RGS5O15539 181 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 PSPNO60542 156 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 OR2H2O95918 312 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 HAND1O96004 215 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 HLA-DQB1P01920 261 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 GYPAP02724 150 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 PPIAL4FP0DN26 164 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 GABRR1P24046 479 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 ETV6P41212 452 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 BTG1P62324 171 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 LSAMPQ13449 338 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 ZNF79Q15937 498 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 HFEQ30201 348 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 BRICD5Q6PL45 260 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 LRRC28Q86X40 367 aaPredicted RBP10.94□□□□□ -0.66
CHD3-210ENST00000479080 DYRK2Q92630 601 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 HPS1Q92902 700 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 MRPS24Q96EL2 167 aaKnown RBP10.94□□□□□ -0.66
CHD3-210ENST00000479080 SULT4A1Q9BR01 284 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 TMEM246Q9BRR3 403 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 ATG5Q9H1Y0 275 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 IFT22Q9H7X7 185 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 DLL4Q9NR61 685 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 EXTL2Q9UBQ6 330 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 PPIAL4AQ9Y536 164 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 MAB21L2Q9Y586 359 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 CSMD1Q96PZ7 3565 aa10.94□□□□□ -0.66
CHD3-210ENST00000479080 PDZD2O15018 2839 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 SPG11Q96JI7 2443 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A10PA6NDY2 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A18PA6NE21 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A16PA6NEW6 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A20PA6NIJ5 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A8PA6NJQ4 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A7PA6NKC0 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A22PA8MWA6 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A12PA8MX19 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A5PA8MXJ8 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A23PA8MXZ1 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 SIRPB1O00241 398 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 SLC33A1O00400 549 aaPredicted RBP10.93□□□□□ -0.66
CHD3-210ENST00000479080 SSX4O60224 188 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 ZNF737O75373 536 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A15PP0C7V4 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A13PP0C7W8 464 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms