RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 PDK2Q15119 407 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 MPPED2Q15777 294 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 MOGQ16653 247 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 PAGE3Q5JUK9 113 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 SAMD4BQ5PRF9 694 aaKnown RBP3.23□□□□□ -1.89
CCDC171-207ENST00000478913 ATAD3BQ5T9A4 648 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 TMEM53Q6P2H8 277 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 DHRS4L2Q6PKH6 230 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 PHF13Q86YI8 300 aaPredicted RBP3.23□□□□□ -1.89
CCDC171-207ENST00000478913 CLVS1Q8IUQ0 354 aaPredicted RBP3.23□□□□□ -1.89
CCDC171-207ENST00000478913 C1orf174Q8IYL3 243 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 ZCCHC24Q8N2G6 241 aaKnown RBP3.23□□□□□ -1.89
CCDC171-207ENST00000478913 RASSF5Q8WWW0 418 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 RDH5Q92781 318 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 ECHDC3Q96DC8 303 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 AMDHD1Q96NU7 426 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 CGREF1Q99674 301 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 C11orf70Q9BRQ4 267 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 C9orf16Q9BUW7 83 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 ZNF331Q9NQX6 463 aaPredicted RBP3.23□□□□□ -1.89
CCDC171-207ENST00000478913 DDIT4Q9NX09 232 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 IL36GQ9NZH8 169 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 ADA2Q9NZK5 511 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 CLCF1Q9UBD9 225 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 MARCOQ9UEW3 520 aaPredicted RBP3.23□□□□□ -1.89
CCDC171-207ENST00000478913 POMPQ9Y244 141 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 ASF1AQ9Y294 204 aa3.23□□□□□ -1.89
CCDC171-207ENST00000478913 KIAA2026Q5HYC2 2103 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 hCG_1818297A0A087WSY0 165 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 A0A0J9YY10 115 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 TRBV11-1A0A0K0K1C0 115 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 TCRBV9S1A1TA0A576 114 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 AIM2O14862 343 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 TAPBPO15533 448 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 KDELR3O43731 214 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 CST8O60676 142 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 OR2J2O76002 312 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 SRP72O76094 671 aaKnown RBP3.22□□□□□ -1.89
CCDC171-207ENST00000478913 SNX4O95219 450 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 APOA1P02647 267 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 IFNA6P05013 189 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 CRHP06850 196 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 ATP6V1B2P21281 511 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 PBLDP30039 288 aaPredicted RBP3.22□□□□□ -1.89
CCDC171-207ENST00000478913 P2RY1P47900 373 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 BCAP31P51572 246 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 TMBIM6P55061 237 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 DEFA1P59665 94 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 DEFA3P59666 94 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 PRPS1P60891 318 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 SNRPD2P62316 118 aaKnown RBP3.22□□□□□ -1.89
CCDC171-207ENST00000478913 ADARB1P78563 741 aaKnown RBP3.22□□□□□ -1.89
CCDC171-207ENST00000478913 LCN2P80188 198 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 RELAQ04206 551 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 CYP24A1Q07973 514 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 CUL2Q13617 745 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 ANKDD1AQ495B1 522 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 ARMC12Q5T9G4 340 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 ANGPTL8Q6UXH0 198 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 TIFABQ6ZNK6 161 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 GDPD3Q7L5L3 318 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 NANOGNBQ7Z5D8 188 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 TRAPPC5Q8IUR0 188 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 ZNF683Q8IZ20 524 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 SLC38A6Q8IZM9 456 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 PGAM4Q8N0Y7 254 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 LRRC25Q8N386 305 aaPredicted RBP3.22□□□□□ -1.89
CCDC171-207ENST00000478913 STEAP2Q8NFT2 490 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 OR1F12Q8NHA8 337 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 SUN5Q8TC36 379 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 ACTL9Q8TC94 416 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 RAB2BQ8WUD1 216 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 MYDGFQ969H8 173 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 CCDC126Q96EE4 140 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 PELI1Q96FA3 418 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 PLEKHA8Q96JA3 519 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 DNAJC1Q96KC8 554 aaKnown RBP3.22□□□□□ -1.89
CCDC171-207ENST00000478913 MCEEQ96PE7 176 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 HIST1H4GQ99525 98 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 ZNF670Q9BS34 389 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 SELENOIQ9C0D9 397 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 NDEL1Q9GZM8 345 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 POLR1EQ9GZS1 481 aaKnown RBP3.22□□□□□ -1.89
CCDC171-207ENST00000478913 RAB1BQ9H0U4 201 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 CXorf21Q9HAI6 301 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 UGT1A8Q9HAW9 530 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 ANKHQ9HCJ1 492 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 DIABLOQ9NR28 239 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 C20orf96Q9NUD7 363 aaPredicted RBP3.22□□□□□ -1.89
CCDC171-207ENST00000478913 KIF25Q9UIL4 384 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 BOKQ9UMX3 212 aaPredicted RBP3.22□□□□□ -1.89
CCDC171-207ENST00000478913 RPH3ALQ9UNE2 315 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 COQ4Q9Y3A0 265 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 ORC6Q9Y5N6 252 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 V9GY05 133 aa3.22□□□□□ -1.89
CCDC171-207ENST00000478913 FUOMA2VDF0 154 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 SYCE1LA8MT33 242 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 BBIP1A8MTZ0 92 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 EVPLLA8MZ36 301 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms