RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 MMP23AO75900 390 aa13.39□□□□□ -0.27
TRIM13-208ENST00000478111 HAND1O96004 215 aa13.39□□□□□ -0.27
TRIM13-208ENST00000478111 KRT8P05787 483 aa13.39□□□□□ -0.27
TRIM13-208ENST00000478111 LOXL3P58215 753 aa13.39□□□□□ -0.27
TRIM13-208ENST00000478111 CD83Q01151 205 aa13.39□□□□□ -0.27
TRIM13-208ENST00000478111 ZNF91Q05481 1191 aa13.39□□□□□ -0.27
TRIM13-208ENST00000478111 EDDM3AQ14507 147 aa13.39□□□□□ -0.27
TRIM13-208ENST00000478111 GID4Q8IVV7 300 aa13.39□□□□□ -0.27
TRIM13-208ENST00000478111 ZNF676Q8N7Q3 588 aa13.39□□□□□ -0.27
TRIM13-208ENST00000478111 CHST6Q9GZX3 395 aa13.39□□□□□ -0.27
TRIM13-208ENST00000478111 TMEM133Q9H2Q1 129 aa13.39□□□□□ -0.27
TRIM13-208ENST00000478111 PLEKHA1Q9HB21 404 aa13.39□□□□□ -0.27
TRIM13-208ENST00000478111 WARS2Q9UGM6 360 aaKnown RBP13.39□□□□□ -0.27
TRIM13-208ENST00000478111 TENM3Q9P273 2699 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 IGKV1-9A0A0C4DH69 117 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 F2RL2O00254 374 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 GATBO75879 557 aaKnown RBP13.38□□□□□ -0.27
TRIM13-208ENST00000478111 SULT1C4O75897 302 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 APOL3O95236 402 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 OR2T7P0C7T2 308 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 DUSP1P28562 367 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 KIR3DL2P43630 455 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 VDAC2P45880 294 aaPredicted RBP13.38□□□□□ -0.27
TRIM13-208ENST00000478111 ISL1P61371 349 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 SLC34A1Q06495 639 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 ZNF146Q15072 292 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 GRK1Q15835 563 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 TCTEX1D4Q5JR98 221 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 FOXB2Q5VYV0 432 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 BAIAP2L2Q6UXY1 529 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 CCDC54Q8NEL0 328 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 OR4P4Q8NGL7 312 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 SGCDQ92629 289 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 EMG1Q92979 244 aaKnown RBP13.38□□□□□ -0.27
TRIM13-208ENST00000478111 BORCS8Q96FH0 119 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 GABARAPL1Q9H0R8 117 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 RBFOX1Q9NWB1 397 aaKnown RBP13.38□□□□□ -0.27
TRIM13-208ENST00000478111 RYR3Q15413 4870 aa13.38□□□□□ -0.27
TRIM13-208ENST00000478111 G3V2T6 193 aa13.37□□□□□ -0.27
TRIM13-208ENST00000478111 PEX14O75381 377 aa13.37□□□□□ -0.27
TRIM13-208ENST00000478111 DNAJC8O75937 253 aaPredicted RBP13.37□□□□□ -0.27
TRIM13-208ENST00000478111 ALX3O95076 343 aa13.37□□□□□ -0.27
TRIM13-208ENST00000478111 BCL3P20749 454 aa13.37□□□□□ -0.27
TRIM13-208ENST00000478111 PEX2P28328 305 aa13.37□□□□□ -0.27
TRIM13-208ENST00000478111 ERP29P30040 261 aaKnown RBP13.37□□□□□ -0.27
TRIM13-208ENST00000478111 HTR1FP30939 366 aa13.37□□□□□ -0.27
TRIM13-208ENST00000478111 POLR2IP36954 125 aaKnown RBP13.37□□□□□ -0.27
TRIM13-208ENST00000478111 OR3A1P47881 315 aa13.37□□□□□ -0.27
TRIM13-208ENST00000478111 ATP6AP1Q15904 470 aa13.37□□□□□ -0.27
TRIM13-208ENST00000478111 RDH10Q8IZV5 341 aa13.37□□□□□ -0.27
TRIM13-208ENST00000478111 DNAAF1Q8NEP3 725 aa13.37□□□□□ -0.27
TRIM13-208ENST00000478111 OR5AU1Q8NGC0 362 aa13.37□□□□□ -0.27
TRIM13-208ENST00000478111 ADAT3Q96EY9 351 aaPredicted RBP13.37□□□□□ -0.27
TRIM13-208ENST00000478111 CLEC7AQ9BXN2 247 aa13.37□□□□□ -0.27
TRIM13-208ENST00000478111 TRBV2A0A0J9YWF9 115 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 LOC107986453A0A1B0GWG9 222 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 MGST3O14880 152 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 ENTPD6O75354 484 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 SERPINA3P01011 423 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 CALCBP10092 127 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 IGLL1P15814 213 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 GABRR1P24046 479 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 CD24P25063 80 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 AZGP1P25311 298 aaKnown RBP13.36□□□□□ -0.27
TRIM13-208ENST00000478111 RBP2P50120 134 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 ZNF85Q03923 595 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 Q8IYB0 196 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 ENTHD1Q8IYW4 607 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 FAM58AQ8N1B3 248 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 NDNFQ8TB73 568 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 C10orf35Q96D05 121 aa13.36□□□□□ -0.27
TRIM13-208ENST00000478111 IGLV1-47P01700 117 aa13.35□□□□□ -0.27
TRIM13-208ENST00000478111 HTR1DP28221 377 aa13.35□□□□□ -0.27
TRIM13-208ENST00000478111 GDNFP39905 211 aa13.35□□□□□ -0.27
TRIM13-208ENST00000478111 ATP1B3P54709 279 aa13.35□□□□□ -0.27
TRIM13-208ENST00000478111 P2RX3P56373 397 aa13.35□□□□□ -0.27
TRIM13-208ENST00000478111 ARSJQ5FYB0 599 aaPredicted RBP13.35□□□□□ -0.27
TRIM13-208ENST00000478111 ZBTB49Q6ZSB9 765 aa13.35□□□□□ -0.27
TRIM13-208ENST00000478111 RNF144BQ7Z419 303 aa13.35□□□□□ -0.27
TRIM13-208ENST00000478111 OR10H4Q8NGA5 316 aa13.35□□□□□ -0.27
TRIM13-208ENST00000478111 PP6455Q8WZ26 134 aa13.35□□□□□ -0.27
TRIM13-208ENST00000478111 EME1Q96AY2 570 aa13.35□□□□□ -0.27
TRIM13-208ENST00000478111 CIB1Q99828 191 aa13.35□□□□□ -0.27
TRIM13-208ENST00000478111 ADI1Q9BV57 179 aa13.35□□□□□ -0.27
TRIM13-208ENST00000478111 UBE2J1Q9Y385 318 aaPredicted RBP13.35□□□□□ -0.27
TRIM13-208ENST00000478111 IGKV1-12A0A0C4DH73 117 aa13.34□□□□□ -0.27
TRIM13-208ENST00000478111 A0A1W2PRX2 142 aa13.34□□□□□ -0.27
TRIM13-208ENST00000478111 IGKV1D-12P01611 117 aa13.34□□□□□ -0.27
TRIM13-208ENST00000478111 AMY1AP04745 511 aa13.34□□□□□ -0.27
TRIM13-208ENST00000478111 AMY2AP04746 511 aa13.34□□□□□ -0.27
TRIM13-208ENST00000478111 ALDOBP05062 364 aa13.34□□□□□ -0.27
TRIM13-208ENST00000478111 UBCP0CG48 685 aaKnown RBP13.34□□□□□ -0.27
TRIM13-208ENST00000478111 PRKACAP17612 351 aa13.34□□□□□ -0.27
TRIM13-208ENST00000478111 POU3F4P49335 361 aa13.34□□□□□ -0.27
TRIM13-208ENST00000478111 SNU13P55769 128 aaKnown RBP13.34□□□□□ -0.27
TRIM13-208ENST00000478111 BDH1Q02338 343 aa13.34□□□□□ -0.27
TRIM13-208ENST00000478111 TP53I3Q53FA7 332 aa13.34□□□□□ -0.27
TRIM13-208ENST00000478111 PRAMEF5Q5TYX0 476 aa13.34□□□□□ -0.27
TRIM13-208ENST00000478111 UTS2BQ765I0 119 aa13.34□□□□□ -0.27
TRIM13-208ENST00000478111 C16orf82Q7Z2V1 217 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms