RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 RHOFQ9HBH0 211 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 C12orf4Q9NQ89 552 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 PLA2G3Q9NZ20 509 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 RCC2Q9P258 522 aaKnown RBP10.53□□□□□ -0.72
PTPRF-212ENST00000477970 SFTPBP07988 381 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 RRADP55042 308 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 SRYQ05066 204 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 SNTB1Q13884 538 aaKnown RBP10.52□□□□□ -0.73
PTPRF-212ENST00000477970 LINC00696Q6ZRV3 163 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF611Q8N823 705 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 TPT1P13693 172 aaKnown RBP10.52□□□□□ -0.73
PTPRF-212ENST00000477970 RBMXP38159 391 aaKnown RBP10.52□□□□□ -0.73
PTPRF-212ENST00000477970 MPV17LQ2QL34 196 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 PIGYQ3MUY2 71 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 OR5A2Q8NGI9 324 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 GTF3AQ92664 365 aaKnown RBP10.52□□□□□ -0.73
PTPRF-212ENST00000477970 WDYHV1Q96HA8 205 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF471Q9BX82 626 aaPredicted RBP10.52□□□□□ -0.73
PTPRF-212ENST00000477970 PRRG4Q9BZD6 226 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 CYTL1Q9NRR1 136 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 TMEM100Q9NV29 134 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 GLS2Q9UI32 602 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 WDFY3Q8IZQ1 3526 aa10.52□□□□□ -0.73
PTPRF-212ENST00000477970 POM121CA8CG34 1229 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF850A8MQ14 1090 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 NUDT19A8MXV4 375 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 TAAR5O14804 337 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 ADAP1O75689 374 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 RFC3P40938 356 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 FGF12P61328 243 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 PRDX4Q13162 271 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 ZDHHC23Q8IYP9 409 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 SLC38A6Q8IZM9 456 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 STPG2Q8N412 459 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 SUN5Q8TC36 379 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 MOB3AQ96BX8 217 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 OR10C1Q96KK4 312 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 SUCNR1Q9BXA5 334 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 STARD10Q9Y365 291 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 ARHGAP21Q5T5U3 1957 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 NUP62P37198 522 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-212ENST00000477970 RBM39Q14498 530 aaKnown RBP10.51□□□□□ -0.73
PTPRF-212ENST00000477970 FAM209AQ5JX71 171 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 UQCC3Q6UW78 93 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 CALHM1Q8IU99 346 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 TMEM178AQ8NBL3 297 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 OR56B2PQ8NGI1 322 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 OR1K1Q8NGR3 316 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 C17orf50Q8WW18 174 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 NAA60Q9H7X0 242 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 METTL8Q9H825 291 aaKnown RBP10.51□□□□□ -0.73
PTPRF-212ENST00000477970 GLRX2Q9NS18 164 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 GPR160Q9UJ42 338 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 CDRT15L2A8MXV6 281 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 GLAP06280 429 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 PI3P19957 117 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 MRPL21Q7Z2W9 205 aaKnown RBP10.51□□□□□ -0.73
PTPRF-212ENST00000477970 MCEMP1Q8IX19 187 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 MKXQ8IYA7 352 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 HPSE2Q8WWQ2 592 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 NANOS1Q8WY41 292 aaKnown RBP10.51□□□□□ -0.73
PTPRF-212ENST00000477970 RSRP1Q9BUV0 290 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 LIME1Q9H400 295 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 PLK3Q9H4B4 646 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 MPC1Q9Y5U8 109 aa10.51□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF503-AS2A6NEH8 195 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 F5H0A9 414 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF728P0DKX0 622 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 PLP2Q04941 152 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 BCL2L2Q92843 193 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-212ENST00000477970 RRNAD1Q96FB5 475 aaKnown RBP10.5□□□□□ -0.73
PTPRF-212ENST00000477970 BOD1Q96IK1 185 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF75AQ96N20 296 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 C5orf49A4QMS7 147 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 IGHV3-9P01782 118 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 HLA-HP01893 362 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 SPINK2P20155 84 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 RAB1AP62820 205 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 NUFIP2Q7Z417 695 aaKnown RBP10.5□□□□□ -0.73
PTPRF-212ENST00000477970 FAM185AQ8N0U4 392 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 SNIP1Q8TAD8 396 aaKnown RBP10.5□□□□□ -0.73
PTPRF-212ENST00000477970 LINC00052Q96N35 136 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 FGF23Q9GZV9 251 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-212ENST00000477970 IFT22Q9H7X7 185 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 KCNIP3Q9Y2W7 256 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 MYO7BQ6PIF6 2116 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 TRBV6-6A0A0A6YYG2 114 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 RAB19A4D1S5 217 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 EIF5AP63241 154 aaKnown RBP10.5□□□□□ -0.73
PTPRF-212ENST00000477970 TMEM187Q14656 261 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 SLC25A26Q70HW3 274 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 BAP18Q8IXM2 172 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 CNTNAP3BQ96NU0 1288 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 CNTNAP3Q9BZ76 1288 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 SLC5A7Q9GZV3 580 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 ZFP57Q9NU63 452 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF581Q9P0T4 197 aa10.5□□□□□ -0.73
PTPRF-212ENST00000477970 OR5B21A6NL26 309 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 C1QTNF9BB2RNN3 333 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 NAPSAO96009 420 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms