RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MNDAP41218 407 aa15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 P2RX3P56373 397 aa15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 MFGE8Q08431 387 aaPredicted RBP15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 HLA-DRB5Q30154 266 aa15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 DEFB136Q30KP8 78 aa15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 ZNF829Q3KNS6 432 aaPredicted RBP15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 HEPN1Q6WQI6 88 aa15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 SBSPONQ8IVN8 264 aa15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 C5orf56Q8N8D9 126 aa15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 CDRT15Q96T59 188 aa15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 ZNF286AQ9HBT8 521 aa15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 MTCH1Q9NZJ7 389 aa15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 V9GYS6 101 aa15.93■□□□□ 0.14
PDLIM1-202ENST00000477757 FAM172BPA6NC97 362 aa15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 BUB1B-PAK6H3BSN5 160 aa15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 MGST3O14880 152 aa15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 PSPNO60542 156 aa15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 CDK2P24941 298 aa15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 ERP29P30040 261 aaKnown RBP15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 MAGEA2P43356 314 aa15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 ESRRGP62508 458 aa15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 CBX1P83916 185 aa15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 ROM1Q03395 351 aa15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 PPP1R8Q12972 351 aaKnown RBP15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 SLX4IPQ5VYV7 408 aa15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 MROQ9BYG7 248 aa15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 LINC00527Q9UJ94 153 aa15.92■□□□□ 0.14
PDLIM1-202ENST00000477757 FAM90A18PA6NE21 464 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 FAM90A16PA6NEW6 464 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 FAM90A20PA6NIJ5 464 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 FAM90A9PA6NNJ1 464 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 DHRS7CA6NNS2 312 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 FAM90A12PA8MX19 464 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 FAM90A5PA8MXJ8 464 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 PRR32B1ATL7 298 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 FGF16O43320 207 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 ZNF254O75437 659 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 FAM90A15PP0C7V4 464 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 FAM90A13PP0C7W8 464 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 FAM90A14PP0C7W9 464 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 FAM90A24PP0C7X0 464 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 HCCSP53701 268 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 MICAQ29983 383 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 SLC35D3Q5M8T2 416 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 ZFAND6Q6FIF0 208 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 CD300LDQ6UXZ3 194 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 THNSL2Q86YJ6 484 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 STPG2Q8N412 459 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 TRMT10AQ8TBZ6 339 aaKnown RBP15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 SLAMF9Q96A28 289 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 CMTM5Q96DZ9 223 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 CADM1Q9BY67 442 aaKnown RBP15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 YIPF3Q9GZM5 350 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 DCLRE1BQ9H816 532 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 IL36RNQ9UBH0 155 aa15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 NKX1-2Q9UD57 310 aaPredicted RBP15.91■□□□□ 0.14
PDLIM1-202ENST00000477757 TRGV10A0A0A0MS01 117 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 H3BN98 237 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 IGHG2P01859 326 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 SLC2A5P22732 501 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 GDNFP39905 211 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 OR3A1P47881 315 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 ZNF91Q05481 1191 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 KIR2DS1Q14954 304 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 TEX38Q6PEX7 206 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 Q6ZSR3 168 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 SLC35E3Q7Z769 313 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 ZNF679Q8IYX0 411 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 CITED4Q96RK1 184 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 NIPSNAP1Q9BPW8 284 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 MOB1AQ9H8S9 216 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 PCDHB16Q9NRJ7 776 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 U3KQV3 271 aa15.9■□□□□ 0.14
PDLIM1-202ENST00000477757 FAM230AA0A1W2PPH8 454 aa15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 A6NIN4 97 aa15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 SRSF10O75494 262 aaKnown RBP15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 RPLP1P05386 114 aaKnown RBP15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 RIDAP52758 137 aaKnown RBP15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 MEPCEQ7L2J0 689 aaKnown RBP15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 CPOQ8IVL8 374 aa15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 FOXRED2Q8IWF2 684 aa15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 ENTHD1Q8IYW4 607 aa15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 BBS1Q8NFJ9 593 aa15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 OR14K1Q8NGZ2 314 aa15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 OR56B4Q8NH76 319 aa15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 EMG1Q92979 244 aaKnown RBP15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 TAS2R3Q9NYW6 316 aa15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 SAMHD1Q9Y3Z3 626 aaKnown RBP15.89■□□□□ 0.13
PDLIM1-202ENST00000477757 IGKV1-27A0A075B6S5 117 aa15.88■□□□□ 0.13
PDLIM1-202ENST00000477757 A0A087X0M5 115 aa15.88■□□□□ 0.13
PDLIM1-202ENST00000477757 A0A1B0GTI1 187 aa15.88■□□□□ 0.13
PDLIM1-202ENST00000477757 A0A1B0GX30 115 aa15.88■□□□□ 0.13
PDLIM1-202ENST00000477757 TOR1AO14656 332 aa15.88■□□□□ 0.13
PDLIM1-202ENST00000477757 E2F6O75461 281 aa15.88■□□□□ 0.13
PDLIM1-202ENST00000477757 LY86O95711 162 aa15.88■□□□□ 0.13
PDLIM1-202ENST00000477757 RPS7P62081 194 aaKnown RBP15.88■□□□□ 0.13
PDLIM1-202ENST00000477757 FHL3Q13643 280 aa15.88■□□□□ 0.13
PDLIM1-202ENST00000477757 RBM39Q14498 530 aaKnown RBP15.88■□□□□ 0.13
PDLIM1-202ENST00000477757 ZNF260Q3ZCT1 412 aa15.88■□□□□ 0.13
PDLIM1-202ENST00000477757 LCNL1Q6ZST4 164 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms