RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 MFGE8Q08431 387 aaPredicted RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 FABP9Q0Z7S8 132 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 FAM53BQ14153 422 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 EIF2B1Q14232 305 aaKnown RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 KIR2DS1Q14954 304 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 QPRTQ15274 297 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 RSU1Q15404 277 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 GABRA6Q16445 453 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 C3AR1Q16581 482 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 LTC4SQ16873 150 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ZNF181Q2M3W8 571 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 C15orf32Q32M92 178 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 SCGB2B2Q4G0G5 96 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 MORN2Q502X0 79 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 CARD16Q5EG05 197 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 TFDP3Q5H9I0 405 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 COL5A1-AS1Q5SY13 56 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 C1orf194Q5T5A4 169 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 FAM162BQ5T6X4 162 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 LYPLAL1Q5VWZ2 237 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ZNF776Q68DI1 518 aaPredicted RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 WDR74Q6RFH5 385 aaPredicted RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 FBXW12Q6X9E4 464 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 Q6ZRP5 223 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 STRADAQ7RTN6 431 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 C6orf120Q7Z4R8 191 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 C5orf24Q7Z6I8 188 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 CROCCP2Q86T23 111 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 NAA40Q86UY6 237 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ZNF444Q8N0Y2 327 aaPredicted RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 CA13Q8N1Q1 262 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 BPIFB2Q8N4F0 458 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 C11orf42Q8N5U0 333 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 NFAM1Q8NET5 270 aaPredicted RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 VN1R2Q8NFZ6 395 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 OR4F6Q8NGB9 312 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 OR52L1Q8NGH7 329 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 OR5M9Q8NGP3 310 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 OR1J1Q8NGS3 322 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 OR4X1Q8NH49 305 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 EEF1AKMT1Q8WVE0 214 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 OR8D1Q8WZ84 308 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 BADQ92934 168 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ART4Q93070 314 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 MYLPFQ96A32 169 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 PTX4Q96A99 478 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 GPR146Q96CH1 333 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 PIK3IP1Q96FE7 263 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 DNAJC30Q96LL9 226 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 TEX37Q96LM6 180 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ZNF488Q96MN9 340 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 DDOQ99489 341 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 GPR22Q99680 433 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 MARVELD1Q9BSK0 173 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 FAAP24Q9BTP7 215 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 LINC00470Q9BZP3 86 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 C20orf85Q9H1P6 137 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 Q9H521 79 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 METTL17Q9H7H0 456 aaPredicted RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 HEXA-AS1Q9H8Q6 139 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 RDH14Q9HBH5 336 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 SLCO1B3Q9NPD5 702 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 SAR1AQ9NR31 198 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ERG28Q9UKR5 140 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 SAMD4AQ9UPU9 718 aaKnown RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 C14orf166Q9Y224 244 aaKnown RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 ST3GAL6Q9Y274 331 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 KLHDC2Q9Y2U9 406 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 YARS2Q9Y2Z4 477 aaKnown RBP2.01□□□□□ -2.09
XRN1-211ENST00000477237 AP4S1Q9Y587 144 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ETV7Q9Y603 341 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 U3KQ87 197 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 V9GYS6 101 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ABCA8O94911 1581 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 KDM5CP41229 1560 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 CFAP74Q9C0B2 1584 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ARAP3Q8WWN8 1544 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ARHGEF12Q9NZN5 1544 aa2.01□□□□□ -2.09
XRN1-211ENST00000477237 ABCC5O15440 1437 aa2□□□□□ -2.09
XRN1-211ENST00000477237 CASKIN1Q8WXD9 1431 aa2□□□□□ -2.09
XRN1-211ENST00000477237 ABCA3Q99758 1704 aa2□□□□□ -2.09
XRN1-211ENST00000477237 CFAP43Q8NDM7 1665 aa2□□□□□ -2.09
XRN1-211ENST00000477237 A0A087WUJ7 227 aa2□□□□□ -2.09
XRN1-211ENST00000477237 A0A087WUU8 490 aa2□□□□□ -2.09
XRN1-211ENST00000477237 NSG1A0A0A6YYJ2 146 aa2□□□□□ -2.09
XRN1-211ENST00000477237 SMIM28A0A1B0GU29 152 aa2□□□□□ -2.09
XRN1-211ENST00000477237 A0A1W2PPR1 153 aa2□□□□□ -2.09
XRN1-211ENST00000477237 A0A1W2PRE2 83 aa2□□□□□ -2.09
XRN1-211ENST00000477237 ANKRD20A5PA0PJZ0 165 aa2□□□□□ -2.09
XRN1-211ENST00000477237 TMEM72A0PK05 275 aa2□□□□□ -2.09
XRN1-211ENST00000477237 TMEM218A2RU14 115 aa2□□□□□ -2.09
XRN1-211ENST00000477237 LRP5LA4QPB2 252 aa2□□□□□ -2.09
XRN1-211ENST00000477237 TMEM8BA6NDV4 472 aa2□□□□□ -2.09
XRN1-211ENST00000477237 LRRC30A6NM36 301 aa2□□□□□ -2.09
XRN1-211ENST00000477237 YJEFN3A6XGL0 299 aa2□□□□□ -2.09
XRN1-211ENST00000477237 J3QR06 171 aa2□□□□□ -2.09
XRN1-211ENST00000477237 SIRPB1O00241 398 aa2□□□□□ -2.09
XRN1-211ENST00000477237 MANBAO00462 879 aa2□□□□□ -2.09
XRN1-211ENST00000477237 UBFD1O14562 309 aaKnown RBP2□□□□□ -2.09
XRN1-211ENST00000477237 OR7A17O14581 309 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms