RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 MTCH1Q9NZJ7 389 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 PLA2G2EQ9NZK7 142 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 ZNRD1Q9P1U0 126 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 AASSQ9UDR5 926 aa8.38□□□□□ -1.07
CCM2-208ENST00000476594 DIMT1Q9UNQ2 313 aaKnown RBP8.38□□□□□ -1.07
CCM2-208ENST00000476594 IGKV1-27A0A075B6S5 117 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 EFCAB10A6NFE3 127 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 H3BUI4 141 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 MGST3O14880 152 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 INMTO95050 263 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 ZFPL1O95159 310 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 NDUFA7O95182 113 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 TFF1P04155 84 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 SAA4P35542 130 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 IER3P46695 156 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 CEBPDP49716 269 aaPredicted RBP8.37□□□□□ -1.07
CCM2-208ENST00000476594 RAG2P55895 527 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 TAS2R43P59537 309 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 PPP3R1P63098 170 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 ZNF146Q15072 292 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 GRK1Q15835 563 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 DHRS7BQ6IAN0 325 aaPredicted RBP8.37□□□□□ -1.07
CCM2-208ENST00000476594 C17orf107Q6ZR85 190 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 BATF2Q8N1L9 274 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 PARP16Q8N5Y8 322 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 CHST4Q8NCG5 386 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 OR4M1Q8NGD0 313 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 APH1BQ8WW43 257 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 THRSPQ92748 146 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 FOXRED1Q96CU9 486 aaPredicted RBP8.37□□□□□ -1.07
CCM2-208ENST00000476594 TMEM80Q96HE8 168 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 ZNF714Q96N38 554 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 S100A13Q99584 98 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 CHIAQ9BZP6 476 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 SLITRK2Q9H156 845 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 DCLRE1BQ9H816 532 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 ISG20L2Q9H9L3 353 aaKnown RBP8.37□□□□□ -1.07
CCM2-208ENST00000476594 PCDHB16Q9NRJ7 776 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 C19orf12Q9NSK7 152 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 CKLFQ9UBR5 152 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 VPREB3Q9UKI3 123 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 MMP24Q9Y5R2 645 aa8.37□□□□□ -1.07
CCM2-208ENST00000476594 IGKV1-9A0A0C4DH69 117 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 A0A1W2PRD5 423 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 A0A1W2PRF3 423 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 A0A1W2PRM7 423 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 MYL12BO14950 172 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 SPRY1O43609 319 aaPredicted RBP8.36□□□□□ -1.07
CCM2-208ENST00000476594 WBP4O75554 376 aaKnown RBP8.36□□□□□ -1.07
CCM2-208ENST00000476594 LIMS3P0CW19 117 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 LIMS4P0CW20 117 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 ZNF728P0DKX0 622 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 TMEM225BP0DP42 221 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 PIPP12273 146 aaPredicted RBP8.36□□□□□ -1.07
CCM2-208ENST00000476594 ZNF44P15621 663 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 BCL3P20749 454 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 TGFBR2P37173 567 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 CAPGP40121 348 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 KLRD1Q13241 179 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 EDDM3AQ14507 147 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 CDK5R1Q15078 307 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 KISS1Q15726 138 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 AANATQ16613 207 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 TMEM200BQ69YZ2 307 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 TRAPPC6BQ86SZ2 158 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 BEND2Q8NDZ0 799 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 OR51A4Q8NGJ6 313 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 OR52N1Q8NH53 320 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 CNIH3Q8TBE1 160 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 TNFRSF14Q92956 283 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 PDCD1LG2Q9BQ51 273 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 VCX3BQ9H321 246 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 GAL3ST2Q9H3Q3 398 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 HMG20AQ9NP66 347 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 RBFOX1Q9NWB1 397 aaKnown RBP8.36□□□□□ -1.07
CCM2-208ENST00000476594 PAK1IP1Q9NWT1 392 aaPredicted RBP8.36□□□□□ -1.07
CCM2-208ENST00000476594 BABAM2Q9NXR7 383 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 CNOT2Q9NZN8 540 aaKnown RBP8.36□□□□□ -1.07
CCM2-208ENST00000476594 SOX21Q9Y651 276 aaPredicted RBP8.36□□□□□ -1.07
CCM2-208ENST00000476594 LINC00312Q9Y6C7 94 aa8.36□□□□□ -1.07
CCM2-208ENST00000476594 TRGV10A0A0A0MS01 117 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 CASQ2O14958 399 aaPredicted RBP8.35□□□□□ -1.07
CCM2-208ENST00000476594 GPR137BO60478 399 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 ZNF737O75373 536 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 KDM4BO94953 1096 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 IGHV4-59P01825 116 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 ERP29P30040 261 aaKnown RBP8.35□□□□□ -1.07
CCM2-208ENST00000476594 MTNR1BP49286 362 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 ARHGDIBP52566 201 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 SNU13P55769 128 aaKnown RBP8.35□□□□□ -1.07
CCM2-208ENST00000476594 SMN1Q16637 294 aaKnown RBP8.35□□□□□ -1.07
CCM2-208ENST00000476594 OGFRL1Q5TC84 451 aaPredicted RBP8.35□□□□□ -1.07
CCM2-208ENST00000476594 OLFML2AQ68BL7 652 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 OR52W1Q6IF63 320 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 LIAT1Q6ZQX7 453 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 STX19Q8N4C7 294 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 PXT1Q8NFP0 134 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 OR5D18Q8NGL1 313 aa8.35□□□□□ -1.07
CCM2-208ENST00000476594 OR10AC1Q8NH08 325 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms