RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 DMC1Q14565 340 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 STK38Q15208 465 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 SDHAF4Q5VUM1 108 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 ZNF547Q8IVP9 402 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 CMTM8Q8IZV2 173 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 CNPY4Q8N129 248 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 SPANXA2-OT1Q8N9U9 137 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 LINC00301Q8NCQ3 95 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 OR10W1Q8NGF6 305 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 OR5B17Q8NGF7 314 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 OR5AR1Q8NGP9 310 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 OR51F2Q8NH61 342 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 SPPL2BQ8TCT7 592 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 RXFP4Q8TDU9 374 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 RAB1CQ92928 201 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 RERGQ96A58 199 aaPredicted RBP2.56□□□□□ -2
PTCD3-211ENST00000476215 MSANTD3Q96H12 275 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 JSRP1Q96MG2 331 aaPredicted RBP2.56□□□□□ -2
PTCD3-211ENST00000476215 ZNF396Q96N95 335 aaPredicted RBP2.56□□□□□ -2
PTCD3-211ENST00000476215 PKMYT1Q99640 499 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 CHCHD7Q9BUK0 85 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 TOLLIPQ9H0E2 274 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 DMAC2Q9NW81 257 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 CCL26Q9Y258 94 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 COMMD3-BMI1R4GMX3 469 aa2.56□□□□□ -2
PTCD3-211ENST00000476215 NBEAQ8NFP9 2946 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 FRYQ5TBA9 3013 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 IGKV1-27A0A075B6S5 117 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 A0A1B0GUH1 482 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 PVALEFA0A1B0GWK0 134 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 TMEM120BA0PK00 339 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 CASQ2O14958 399 aaPredicted RBP2.55□□□□□ -2
PTCD3-211ENST00000476215 HCRTO43612 131 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 YEATS4O95619 227 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 TGM6O95932 706 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 TNNC2P02585 160 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 MT-ND4P03905 459 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 GABRG2P18507 467 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 PSMB5P28074 263 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 GGT2P36268 569 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 FUT5Q11128 374 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 AKAP13Q12802 2813 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 PTPRJQ12913 1337 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 PDGFRLQ15198 375 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 SLC25A35Q3KQZ1 300 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 BEX5Q5H9J7 111 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 FAM222AQ5U5X8 452 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 RESP18Q5W5W9 173 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 GUSBP11Q6P575 273 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 Q6ZS52 159 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 CFAP47Q6ZTR5 3102 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 MICU2Q8IYU8 434 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 ZNF101Q8IZC7 436 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 DMXL2Q8TDJ6 3036 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 CCDC127Q96BQ5 260 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 ANKRD36BP1Q96IX9 119 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 GPR21Q99679 349 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 MRPS30Q9NP92 439 aaKnown RBP2.55□□□□□ -2
PTCD3-211ENST00000476215 AGPAT3Q9NRZ7 376 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 MRPL22Q9NWU5 206 aaKnown RBP2.55□□□□□ -2
PTCD3-211ENST00000476215 RAB23Q9ULC3 237 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 KMT2BQ9UMN6 2715 aaPredicted RBP2.55□□□□□ -2
PTCD3-211ENST00000476215 WDFY3Q8IZQ1 3526 aa2.55□□□□□ -2
PTCD3-211ENST00000476215 CACNA1BQ00975 2339 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 CITO14578 2027 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 ITPR1Q14643 2758 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 IGHV1-3A0A0C4DH29 117 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 K7EQS6 105 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 KLRC4O43908 158 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 SLC16A7O60669 478 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 SLC19A2O60779 497 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 ANXA8P13928 327 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 RAB5AP20339 215 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 CASP1P29466 404 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 MYCNOSP40205 109 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 RPS5P46782 204 aaKnown RBP2.54□□□□□ -2
PTCD3-211ENST00000476215 UBE2E1P51965 193 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 MYL6P60660 151 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 IFITM3Q01628 133 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 RAD51Q06609 339 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 ANXA8L1Q5VT79 327 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 OPN5Q6U736 354 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 WDR82Q6UXN9 313 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 CALHM3Q86XJ0 350 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 APRG1Q8IVJ8 170 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 NELFCDQ8IXH7 590 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 C8orf31Q8N9H6 132 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 APCDD1LQ8NCL9 501 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 KCNS1Q96KK3 526 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 KCNS3Q9BQ31 491 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 NUDT9Q9BW91 350 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 BLZF1Q9H2G9 400 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 ZNF442Q9H7R0 627 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 LYRM4Q9HD34 91 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 MCUBQ9NWR8 336 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 IL37Q9NZH6 218 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 CFAP45Q9UL16 551 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 YARS2Q9Y2Z4 477 aaKnown RBP2.54□□□□□ -2
PTCD3-211ENST00000476215 CACNA1GO43497 2377 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 FREM2Q5SZK8 3169 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms