RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 MMP9P14780 707 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 PRKACAP17612 351 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 BCL3P20749 454 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 BDKRB2P30411 391 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 GPR50Q13585 617 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 IRF3Q14653 427 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 ZNF146Q15072 292 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 MED22Q15528 200 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 C9orf139Q6ZV77 190 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 PRSS48Q7RTY5 328 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 SATL1Q86VE3 508 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 BATF2Q8N1L9 274 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 FGFRL1Q8N441 504 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 PXT1Q8NFP0 134 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 OR5D18Q8NGL1 313 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 CCDC90BQ9GZT6 254 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 HMG20AQ9NP66 347 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 PCDHB16Q9NRJ7 776 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 RBFOX1Q9NWB1 397 aaKnown RBP11.92□□□□□ -0.5
ABCF3-211ENST00000475728 PAK1IP1Q9NWT1 392 aaPredicted RBP11.92□□□□□ -0.5
ABCF3-211ENST00000475728 ZNF69Q9UC07 566 aa11.92□□□□□ -0.5
ABCF3-211ENST00000475728 TRBV5-7A0A0A0MS05 114 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 RNF212BA8MTL3 300 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 F8VVB4 439 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 F8VWA3 439 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 SH2D1BO14796 132 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 IGHV4-38-2P0DP08 117 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 FSTP19883 344 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 EEF1B2P24534 225 aaKnown RBP11.91□□□□□ -0.5
ABCF3-211ENST00000475728 NPBWR2P48146 333 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 MTNR1BP49286 362 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 CEBPDP49716 269 aaPredicted RBP11.91□□□□□ -0.5
ABCF3-211ENST00000475728 ZP1P60852 638 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 RPS11P62280 158 aaKnown RBP eCLIP11.91□□□□□ -0.5
ABCF3-211ENST00000475728 RPL31P62899 125 aaKnown RBP11.91□□□□□ -0.5
ABCF3-211ENST00000475728 COL10A1Q03692 680 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 DDI2Q5TDH0 399 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 GDPD3Q7L5L3 318 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 FAM185AQ8N0U4 392 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 OR8H2Q8N162 312 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 OR51A2Q8NGJ7 313 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 OR13C5Q8NGS8 318 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 ZFAND2BQ8WV99 257 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 TNFAIP8L1Q8WVP5 186 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 UFD1Q92890 307 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 SNX22Q96L94 193 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 TBX15Q96SF7 602 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 S100A13Q99584 98 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 SLC6A7Q99884 636 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 EXOSC4Q9NPD3 245 aaKnown RBP11.91□□□□□ -0.5
ABCF3-211ENST00000475728 ISYNA1Q9NPH2 558 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 FOXJ3Q9UPW0 622 aa11.91□□□□□ -0.5
ABCF3-211ENST00000475728 LSM2Q9Y333 95 aaKnown RBP11.91□□□□□ -0.5
ABCF3-211ENST00000475728 SVEP1Q4LDE5 3571 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 IGKV1-12A0A0C4DH73 117 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 MRPS14O60783 128 aaKnown RBP11.9□□□□□ -0.5
ABCF3-211ENST00000475728 ZNF737O75373 536 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 IGKV1D-12P01611 117 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 SFTPBP07988 381 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 IGFBP3P17936 291 aaPredicted RBP11.9□□□□□ -0.5
ABCF3-211ENST00000475728 ZNF93P35789 620 aaPredicted RBP11.9□□□□□ -0.5
ABCF3-211ENST00000475728 TGFBR2P37173 567 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 HILS1P60008 231 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 GUCA2AQ02747 115 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 RSU1Q15404 277 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 NCR3LG1Q68D85 454 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 ELP2Q6IA86 826 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 METAP1DQ6UB28 335 aaPredicted RBP11.9□□□□□ -0.5
ABCF3-211ENST00000475728 CDH26Q8IXH8 852 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 CHST4Q8NCG5 386 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 OR52N4Q8NGI2 321 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 DERL3Q96Q80 235 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 OR14A2Q96R54 314 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 OR5M11Q96RB7 305 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 METTL8Q9H825 291 aaKnown RBP11.9□□□□□ -0.5
ABCF3-211ENST00000475728 ZMAT3Q9HA38 289 aaKnown RBP11.9□□□□□ -0.5
ABCF3-211ENST00000475728 ELL3Q9HB65 397 aaPredicted RBP11.9□□□□□ -0.5
ABCF3-211ENST00000475728 GSTK1Q9Y2Q3 226 aa11.9□□□□□ -0.5
ABCF3-211ENST00000475728 IGHV1-69DA0A0B4J2H0 117 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 FUOMA2VDF0 154 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 MEGF11A6BM72 1044 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 TRIM77I1YAP6 450 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 GABRPO00591 440 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 DENRO43583 198 aaKnown RBP11.89□□□□□ -0.51
ABCF3-211ENST00000475728 ZNF780AO75290 641 aaPredicted RBP11.89□□□□□ -0.51
ABCF3-211ENST00000475728 IGHV1-69P01742 117 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 GABRR1P24046 479 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 PTGFRP43088 359 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 GABARAPL2P60520 117 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 DOC2BQ14184 412 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 TRAM1Q15629 374 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 ASPHD2Q6ICH7 369 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 VMO1Q7Z5L0 202 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 C22orf15Q8WYQ4 148 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 SGCDQ92629 289 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 LHX4Q969G2 390 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 YTHDF1Q9BYJ9 559 aaKnown RBP11.89□□□□□ -0.51
ABCF3-211ENST00000475728 FAM192AQ9GZU8 254 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 METTL9Q9H1A3 318 aa11.89□□□□□ -0.51
ABCF3-211ENST00000475728 UNKLQ9H9P5 680 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms