RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PHYHO14832 338 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 NPY1RP25929 384 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 CDKN2CP42773 168 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 GCLMP48507 274 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 RBMY1FQ15415 496 aaKnown RBP3.39□□□□□ -1.87
SMC5-203ENST00000475540 SLC25A35Q3KQZ1 300 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 C6orf99Q4VX62 202 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 KPRPQ5T749 579 aaPredicted RBP3.39□□□□□ -1.87
SMC5-203ENST00000475540 OGFRL1Q5TC84 451 aaPredicted RBP3.39□□□□□ -1.87
SMC5-203ENST00000475540 MDP1Q86V88 176 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 SLC13A5Q86YT5 568 aaPredicted RBP3.39□□□□□ -1.87
SMC5-203ENST00000475540 KRT222Q8N1A0 295 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 C2orf73Q8N5S3 287 aaPredicted RBP3.39□□□□□ -1.87
SMC5-203ENST00000475540 SNF8Q96H20 258 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 GPR22Q99680 433 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 FGFR1OP2Q9NVK5 253 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 MTCH2Q9Y6C9 303 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 IGSF9BQ9UPX0 1349 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 UNC13AQ9UPW8 1703 aa3.39□□□□□ -1.87
SMC5-203ENST00000475540 A0A1W2PP18 115 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 COLCA2A8K830 154 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 LRRN3E7EW58 273 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 F5H5K5 113 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 M0QZ92 97 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 ZW10O43264 779 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 RP2O75695 350 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 SLC22A5O76082 557 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 SLC25A14O95258 325 aaPredicted RBP3.38□□□□□ -1.87
SMC5-203ENST00000475540 BCHEP06276 602 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 CELP19835 753 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 DTYMKP23919 212 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 POLR2IP36954 125 aaKnown RBP3.38□□□□□ -1.87
SMC5-203ENST00000475540 CRADDP78560 199 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 CYP24A1Q07973 514 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 STX5Q13190 355 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 PNOCQ13519 176 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 KDM4DQ6B0I6 523 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 LAMTOR1Q6IAA8 161 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 OPN5Q6U736 354 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 FAM183BPQ6ZVS7 135 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 NCCRP1Q6ZVX7 275 aaPredicted RBP3.38□□□□□ -1.87
SMC5-203ENST00000475540 CCNYL1Q8N7R7 359 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 CCDC112Q8NEF3 446 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 OR13G1Q8NGZ3 307 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 OR5W2Q8NH69 310 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 ESR2Q92731 530 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 PTX4Q96A99 478 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 TM4SF18Q96CE8 201 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 OR10C1Q96KK4 312 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 PGLYRP3Q96LB9 341 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 BIRC8Q96P09 236 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 QKIQ96PU8 341 aaKnown RBP eCLIP3.38□□□□□ -1.87
SMC5-203ENST00000475540 RBP7Q96R05 134 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 UGT2B28Q9BY64 529 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 SAMD10Q9BYL1 202 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 FBXO6Q9NRD1 293 aaPredicted RBP3.38□□□□□ -1.87
SMC5-203ENST00000475540 TAS2R13Q9NYV9 303 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 PRO0628Q9UI54 55 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 ZNF222Q9UK12 451 aa3.38□□□□□ -1.87
SMC5-203ENST00000475540 TBL2Q9Y4P3 447 aaKnown RBP3.38□□□□□ -1.87
SMC5-203ENST00000475540 PLA2R1Q13018 1463 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 IGLV1-50A0A075B6I6 118 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 IGHV3-66A0A0C4DH42 116 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 INS-IGF2F8WCM5 200 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 CCRL2O00421 344 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 UPK2O00526 184 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 SSNA1O43805 119 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 ENTPD6O75354 484 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 NQO1P15559 274 aaKnown RBP3.37□□□□□ -1.87
SMC5-203ENST00000475540 ZNF14P17017 642 aaPredicted RBP3.37□□□□□ -1.87
SMC5-203ENST00000475540 ATF1P18846 271 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 TSPOP30536 169 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 GFERP55789 205 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 BASP1P80723 227 aaKnown RBP3.37□□□□□ -1.87
SMC5-203ENST00000475540 PPIDQ08752 370 aaKnown RBP3.37□□□□□ -1.87
SMC5-203ENST00000475540 IMPG1Q17R60 797 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 TBC1D28Q2M2D7 210 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 CLEC19AQ6UXS0 136 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 Q6ZSR6 202 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 FAM92BQ6ZTR7 304 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 UBALD2Q8IYN6 164 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 BLIDQ8IZY5 108 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 ZCCHC24Q8N2G6 241 aaKnown RBP3.37□□□□□ -1.87
SMC5-203ENST00000475540 Q8N402 240 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 SMIM19Q96E16 107 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 SMIM8Q96KF7 97 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 OR2A5Q96R48 311 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 DERL2Q9GZP9 239 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 ARL6Q9H0F7 186 aa3.37□□□□□ -1.87
SMC5-203ENST00000475540 TET2Q6N021 2002 aaPredicted RBP3.37□□□□□ -1.87
SMC5-203ENST00000475540 MN1Q10571 1320 aaPredicted RBP3.37□□□□□ -1.87
SMC5-203ENST00000475540 IGKV1-27A0A075B6S5 117 aa3.36□□□□□ -1.87
SMC5-203ENST00000475540 TRAV40A0A0B4J280 105 aa3.36□□□□□ -1.87
SMC5-203ENST00000475540 OR2AT4A6NND4 320 aa3.36□□□□□ -1.87
SMC5-203ENST00000475540 ZNF705GA8MUZ8 300 aaPredicted RBP3.36□□□□□ -1.87
SMC5-203ENST00000475540 EFCAB9A8MZ26 197 aa3.36□□□□□ -1.87
SMC5-203ENST00000475540 F5H768 121 aa3.36□□□□□ -1.87
SMC5-203ENST00000475540 H0Y980 276 aa3.36□□□□□ -1.87
SMC5-203ENST00000475540 I3L4J1 428 aa3.36□□□□□ -1.87
SMC5-203ENST00000475540 M0R036 132 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms