RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 ANGPTL6Q8NI99 470 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 SDSLQ96GA7 329 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 ZNF488Q96MN9 340 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 SPACA1Q9HBV2 294 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 TMEM165Q9HC07 324 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 ZNF222Q9UK12 451 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 NAV2Q8IVL1 2488 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 A0A0A6YYH2 397 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 TMEM272A0A1B0GTI8 110 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 NKX6-3A6NJ46 265 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 A6NJ64 397 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 SH2D1BO14796 132 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 CRTAPO75718 401 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-224ENST00000475524 PSG2P11465 335 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 LMO1P25800 156 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 C11orf91Q3C1V1 193 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 Q5PR19 223 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 SLC36A1Q7Z2H8 476 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 FAM89BQ8N5H3 189 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 BOLLQ8N9W6 283 aaKnown RBP12.68□□□□□ -0.38
MCF2L-224ENST00000475524 TMEM104Q8NE00 496 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 OR10K1Q8NGX5 313 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 LGALS14Q8TCE9 139 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 MED30Q96HR3 178 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 NUDT16L1Q9BRJ7 211 aaKnown RBP12.68□□□□□ -0.38
MCF2L-224ENST00000475524 TMEM246Q9BRR3 403 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 BPESC1Q9GZL8 116 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 SLIRPQ9GZT3 109 aaKnown RBP12.68□□□□□ -0.38
MCF2L-224ENST00000475524 NXF2Q9GZY0 626 aaKnown RBP12.68□□□□□ -0.38
MCF2L-224ENST00000475524 MIOXQ9UGB7 285 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 ST3GAL6Q9Y274 331 aa12.68□□□□□ -0.38
MCF2L-224ENST00000475524 IGKV1D-17A0A075B6S4 117 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 METTL21EPA6NDL7 271 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 C3orf80F5H4A9 247 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 MPIG6BO95866 241 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 GLAP06280 429 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 CHRM2P08172 466 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 SNRPBP14678 240 aaKnown RBP12.67□□□□□ -0.38
MCF2L-224ENST00000475524 CARTPTQ16568 116 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 FAM201AQ5SY85 155 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 RAB12Q6IQ22 244 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 ZNF788Q6ZQV5 615 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 KRTAP1-3Q8IUG1 177 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 ZNF561Q8N587 486 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 RAB40AQ8WXH6 277 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 SELENOIQ9C0D9 397 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 FAM234AQ9H0X4 552 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 LPAR5Q9H1C0 372 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 ABCG5Q9H222 651 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 ZNF665Q9H7R5 613 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 PDZD2O15018 2839 aa12.67□□□□□ -0.38
MCF2L-224ENST00000475524 A0A1W2PP11 408 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 RFPL4AA6NLU0 287 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 F5H0A9 414 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-224ENST00000475524 RFPL4AL1F8VTS6 287 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 GPR37O15354 613 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 SIGLEC5O15389 551 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 HAND1O96004 215 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 PAHP00439 452 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 APOA1P02647 267 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 PRDX2P32119 198 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 KCNJ3P48549 501 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 ART1P52961 327 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 IL13RA1P78552 427 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 ARL6IP1Q15041 203 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 UBE2NLQ5JXB2 153 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 SFRP4Q6FHJ7 346 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-224ENST00000475524 NLRC3Q7RTR2 1065 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 OR56B1Q8NGI3 324 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 PPP1R35Q8TAP8 253 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 FAM46BQ96A09 425 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 RAB39BQ96DA2 213 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 GAL3ST1Q99999 423 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 MMP27Q9H306 513 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 BANF2Q9H503 90 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 PATZ1Q9HBE1 687 aaKnown RBP12.66□□□□□ -0.38
MCF2L-224ENST00000475524 RHBDL2Q9NX52 303 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 RCC2Q9P258 522 aaKnown RBP12.66□□□□□ -0.38
MCF2L-224ENST00000475524 ITPR2Q14571 2701 aa12.66□□□□□ -0.38
MCF2L-224ENST00000475524 PRRC2AP48634 2157 aaKnown RBP12.66□□□□□ -0.38
MCF2L-224ENST00000475524 IGHV4-30-2A0A087WSY4 118 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 A0A0B4J203 849 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 ISPDA4D126 451 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 CEACAM18A8MTB9 384 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 CSN2P05814 226 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 HEXAP06865 529 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 NPY4RP50391 375 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 PAX5Q02548 391 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 PIGYQ3MUY2 71 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 AVPI1Q5T686 147 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 OR10K2Q6IF99 312 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 Q6P435 159 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 DEFB108BQ8NET1 73 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 SLC25A38Q96DW6 304 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 SEH1LQ96EE3 360 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 NEIL1Q96FI4 390 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-224ENST00000475524 DCUN1D5Q9BTE7 237 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 IL36RNQ9UBH0 155 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 ADAM30Q9UKF2 790 aa12.65□□□□□ -0.38
MCF2L-224ENST00000475524 HSF4Q9ULV5 492 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms