RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SPACA5Q96QH8 159 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 RTL8AQ9BWD3 113 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 ZNF665Q9H7R5 613 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 TMEM100Q9NV29 134 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 TRAV20A0A0B4J274 112 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 TMEM272A0A1B0GTI8 110 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 PQLC2LA1A4F0 135 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 J3QRK9 145 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 KDM4BO94953 1096 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 OR3A4PP47883 348 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 GNG3P63215 75 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 MRPS10P82664 201 aaKnown RBP13.11□□□□□ -0.31
CPSF3-203ENST00000475482 TNFAIP6P98066 277 aaPredicted RBP13.11□□□□□ -0.31
CPSF3-203ENST00000475482 KRTAP24-1Q3LI83 254 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 ZNF573Q86YE8 665 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 PXT1Q8NFP0 134 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 OR5P3Q8WZ94 311 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 RAB39BQ96DA2 213 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 SLC25A38Q96DW6 304 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 TIMD4Q96H15 378 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 RNF170Q96K19 258 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 SOSTQ9BQB4 213 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 URM1Q9BTM9 101 aaKnown RBP13.11□□□□□ -0.31
CPSF3-203ENST00000475482 METTL9Q9H1A3 318 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 ATG5Q9H1Y0 275 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 IL19Q9UHD0 177 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 ING4Q9UNL4 249 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 DOCK11Q5JSL3 2073 aa13.11□□□□□ -0.31
CPSF3-203ENST00000475482 LDLRAD4O15165 306 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 XRCC3O43542 346 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 UPK1BO75841 260 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 CSTBP04080 98 aaKnown RBP13.1□□□□□ -0.31
CPSF3-203ENST00000475482 CA6P23280 308 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 MNDAP41218 407 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 RSU1Q15404 277 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 OR8G1Q15617 311 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 TMEM69Q5SWH9 247 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 MKXQ8IYA7 352 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 SAXO1Q8IYX7 474 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 OR13G1Q8NGZ3 307 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 FAM46BQ96A09 425 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 RFT1Q96AA3 541 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 ITPKCQ96DU7 683 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 SRRQ9GZT4 340 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 PPP1R3EQ9H7J1 279 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 ELL3Q9HB65 397 aaPredicted RBP13.1□□□□□ -0.31
CPSF3-203ENST00000475482 C14orf119Q9NWQ9 140 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 DCAF16Q9NXF7 216 aa13.1□□□□□ -0.31
CPSF3-203ENST00000475482 ISPDA4D126 451 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 TMEM210A6NLX4 147 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 TMEM14DPA8MWL7 114 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 ZNF732B4DXR9 585 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 CTDSPLO15194 276 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 IGHV2-70P01814 119 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 CHRM2P08172 466 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 VSIG8P0DPA2 414 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 TNFRSF1AP19438 455 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 TNFSF4P23510 183 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 INPP1P49441 399 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 DEFA1P59665 94 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 DEFA3P59666 94 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 ZP1P60852 638 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 PDZK1IP1Q13113 114 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 HACD4Q5VWC8 232 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 C1orf229Q6ZS94 237 aaPredicted RBP13.09□□□□□ -0.31
CPSF3-203ENST00000475482 OR8H2Q8N162 312 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 Q8N402 240 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 OR2Z1Q8NG97 314 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 OR5D18Q8NGL1 313 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 MRPS24Q96EL2 167 aaKnown RBP13.09□□□□□ -0.31
CPSF3-203ENST00000475482 NUDT16L1Q9BRJ7 211 aaKnown RBP13.09□□□□□ -0.31
CPSF3-203ENST00000475482 ADAT1Q9BUB4 502 aaKnown RBP13.09□□□□□ -0.31
CPSF3-203ENST00000475482 TMEM59Q9BXS4 323 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 RHOFQ9HBH0 211 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 LPAR2Q9HBW0 351 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 TMEM106BQ9NUM4 274 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 IL36GQ9NZH8 169 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 NPTNQ9Y639 398 aa13.09□□□□□ -0.31
CPSF3-203ENST00000475482 A0A0G2JMP0 313 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 A0A0X1KG70 313 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 CRTAPO75718 401 aaPredicted RBP13.08□□□□□ -0.32
CPSF3-203ENST00000475482 AVPP01185 164 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 GTF2F2P13984 249 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 CDK2P24941 298 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 GPM6AP51674 278 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 QRFPP83859 136 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 SCN1BQ07699 218 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 ARL6IP1Q15041 203 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 ZNF79Q15937 498 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 SLC22A6Q4U2R8 563 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 TRIQKQ629K1 86 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 ASCL4Q6XD76 172 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 OR4M2Q8NGB6 313 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 ITLN1Q8WWA0 313 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 HPSE2Q8WWQ2 592 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 PKIBQ9C010 78 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 GCM1Q9NP62 436 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 MRPS7Q9Y2R9 242 aaKnown RBP13.08□□□□□ -0.32
CPSF3-203ENST00000475482 POLDIP2Q9Y2S7 368 aa13.08□□□□□ -0.32
CPSF3-203ENST00000475482 IGKV1-27A0A075B6S5 117 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms