RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 OPCMLQ14982 345 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 SURF2Q15527 256 aaPredicted RBP13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 RBMXL3Q8N7X1 1067 aaKnown RBP13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 ZNF680Q8NEM1 530 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 TMEM230Q96A57 120 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 SEC22AQ96IW7 307 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 OR2J1Q9GZK6 312 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 C12orf4Q9NQ89 552 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 PRRC2CQ9Y520 2896 aaKnown RBP13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 FRYQ5TBA9 3013 aa13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 K7EM74 188 aa13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 SYNGR1O43759 233 aa13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 TNFSF13O75888 250 aa13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 CRYABP02511 175 aaKnown RBP13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 SPINK2P20155 84 aa13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 ECI1P42126 302 aa13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 FGL1Q08830 312 aa13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 ZNF610Q8N9Z0 462 aa13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 COMMD9Q9P000 198 aa13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 LUZP4Q9P127 313 aa13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 C14orf166Q9Y224 244 aaKnown RBP13.16□□□□□ -0.3
RPUSD3-215ENST00000475470 RFPL4AA6NLU0 287 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 PRSS44E7EML9 344 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 RFPL4AL1F8VTS6 287 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 AGFG2O95081 481 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 SFT2D2O95562 160 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 MPC2O95563 127 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 PMELP40967 661 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 UCP2P55851 309 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 SRSF4Q08170 494 aaKnown RBP13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 DAZAP2Q15038 168 aaPredicted RBP13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 SLC9A3R2Q15599 337 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 TMEM211Q6ICI0 200 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 CXorf67Q86X51 503 aaPredicted RBP13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 WDR31Q8NA23 367 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 OR1J1Q8NGS3 322 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 STARD4Q96DR4 205 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 OPN3Q9H1Y3 402 aaPredicted RBP13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 ZNF286AQ9HBT8 521 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 MBD3L4A6NDZ8 208 aaPredicted RBP13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 MBD3L3A6NE82 208 aaPredicted RBP13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 MBD3L5A6NJ08 208 aaPredicted RBP13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 MKRN2OSH3BPM6 223 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 WDR1O75083 606 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 CD8AP01732 235 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 ERVS71-1P61550 626 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 PLEKHN1Q494U1 663 aaPredicted RBP13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 NHLRC3Q5JS37 347 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 SLC22A25Q6T423 547 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 CLEC18BQ6UXF7 455 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 MBD3L2Q8NHZ7 208 aaPredicted RBP13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 SLC25A40Q8TBP6 338 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 EXTL1Q92935 676 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 BOD1Q96IK1 185 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 HS3ST6Q96QI5 342 aa13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 CHMP1AQ9HD42 196 aaPredicted RBP13.15□□□□□ -0.3
RPUSD3-215ENST00000475470 KNG1P01042 644 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 MPV17LQ2QL34 196 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 SEM1Q6ZVN7 128 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 RTL8AQ9BWD3 113 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 TRAV14DV4A0A0A6YYC5 116 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 C5orf51A6NDU8 294 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 DBX1A6NMT0 343 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 TPD52L2O43399 206 aaKnown RBP13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 IFNA7P01567 189 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 IGKV3-15P01624 115 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 RAC2P15153 192 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 PRKACAP17612 351 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 PTPRZ1P23471 2315 aaPredicted RBP13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 CALCRP30988 508 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 IL24Q13007 206 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 IKZF1Q13422 519 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 COQ8AQ8NI60 647 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 MICU1Q9BPX6 476 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 OR51I2Q9H344 312 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 PLK3Q9H4B4 646 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 IL36RNQ9UBH0 155 aa13.14□□□□□ -0.31
RPUSD3-215ENST00000475470 AKAP13Q12802 2813 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 C13orf42A0A1B0GVH6 325 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 CGAP01215 116 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 S100A11P31949 105 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 SUPT4H1P63272 117 aaKnown RBP13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 P2RY6Q15077 328 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 LRRC37A5PQ49AS3 106 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 ZNF660Q6AZW8 331 aaPredicted RBP13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 DHRS11Q6UWP2 260 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 C17orf78Q8N4C9 275 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 ZNF488Q96MN9 340 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 PKIBQ9C010 78 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 ZNF71Q9NQZ8 489 aaPredicted RBP13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 GTF3C1Q12789 2109 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 EEF1E1-BLOC1S5C9J1V9 151 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 DUSP1P28562 367 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 PTGER4P35408 488 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 P2RX3P56373 397 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 GSG1LQ6UXU4 331 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 BEND4Q6ZU67 534 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 TMUB2Q71RG4 321 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 OR8H3Q8N146 312 aa13.13□□□□□ -0.31
RPUSD3-215ENST00000475470 C17orf50Q8WW18 174 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms