RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ZNF737O75373 536 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 CD2P06729 351 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 HKR1P10072 659 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 RAB3AP20336 220 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 COMPP49747 757 aaPredicted RBP19.68■□□□□ 0.74
CPNE1-223ENST00000475146 EDDM3BP56851 147 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 LAIR2Q6ISS4 152 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 AHSA2Q719I0 299 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 GDPD3Q7L5L3 318 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 PNKDQ8N490 385 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 BPIFB6Q8NFQ5 453 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 TBC1D15Q8TC07 691 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 RPS4Y2Q8TD47 263 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 TFAP2CQ92754 450 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 SMIM19Q96E16 107 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 UNKLQ9H9P5 680 aaKnown RBP19.68■□□□□ 0.74
CPNE1-223ENST00000475146 CNOT2Q9NZN8 540 aaKnown RBP19.68■□□□□ 0.74
CPNE1-223ENST00000475146 GLS2Q9UI32 602 aa19.68■□□□□ 0.74
CPNE1-223ENST00000475146 SIRT4Q9Y6E7 314 aaPredicted RBP19.68■□□□□ 0.74
CPNE1-223ENST00000475146 IGKV1-12A0A0C4DH73 117 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 ALX3O95076 343 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 IGKV1D-12P01611 117 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 CCL3L1P16619 93 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 GABRR1P24046 479 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 EDDM3AQ14507 147 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 ZNF273Q14593 569 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 AWAT1Q58HT5 328 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 C16orf87Q6PH81 154 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 OR8H2Q8N162 312 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 STX19Q8N4C7 294 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 FBLIM1Q8WUP2 373 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 SSMEM1Q8WWF3 244 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 SNX22Q96L94 193 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 HMG20AQ9NP66 347 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 TAS2R4Q9NYW5 299 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 PSORS1C1Q9UIG5 152 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 GSTK1Q9Y2Q3 226 aa19.67■□□□□ 0.74
CPNE1-223ENST00000475146 TMEM82A0PJX8 343 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 MAGEB3O15480 346 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 OGG1O15527 345 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 KDM4BO94953 1096 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 LALBAP00709 142 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 TMEM225BP0DP42 221 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 UBE2E1P51965 193 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 KISS1Q15726 138 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 SPIN3Q5JUX0 258 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 SAXO1Q8IYX7 474 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 C3orf56Q8N813 242 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 ZFP41Q8N8Y5 198 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 ZSCAN4Q8NAM6 433 aaPredicted RBP19.66■□□□□ 0.74
CPNE1-223ENST00000475146 ZNF281Q9Y2X9 895 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 SF3B6Q9Y3B4 125 aaKnown RBP19.66■□□□□ 0.74
CPNE1-223ENST00000475146 PCDHGB5Q9Y5G0 923 aa19.66■□□□□ 0.74
CPNE1-223ENST00000475146 hCG_1809904A0A1W2PP81 198 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 A0A1W2PPE2 198 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 A0A1W2PR64 198 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 A0A1W2PRV1 198 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 MEIOCA2RUB1 952 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 FBP1P09467 338 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 SAA4P35542 130 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 AQP4P55087 323 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 FOXL1Q12952 345 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 ZNF146Q15072 292 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 GRK1Q15835 563 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 SATL1Q86VE3 508 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 LDLRAD3Q86YD5 345 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 TMEM86BQ8N661 226 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 OR51A2Q8NGJ7 313 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 NRG4Q8WWG1 115 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 TMEM106AQ96A25 262 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 CPNE2Q96FN4 548 aaPredicted RBP19.65■□□□□ 0.74
CPNE1-223ENST00000475146 GPER1Q99527 375 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 CHST6Q9GZX3 395 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 EXOSC4Q9NPD3 245 aaKnown RBP19.65■□□□□ 0.74
CPNE1-223ENST00000475146 PLCXD1Q9NUJ7 323 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 POMT1Q9Y6A1 747 aa19.65■□□□□ 0.74
CPNE1-223ENST00000475146 MEX3AA1L020 520 aaKnown RBP19.64■□□□□ 0.73
CPNE1-223ENST00000475146 SIRPB1O00241 398 aa19.64■□□□□ 0.73
CPNE1-223ENST00000475146 MYL12BO14950 172 aa19.64■□□□□ 0.73
CPNE1-223ENST00000475146 PAHP00439 452 aa19.64■□□□□ 0.73
CPNE1-223ENST00000475146 CFPP27918 469 aa19.64■□□□□ 0.73
CPNE1-223ENST00000475146 ZP1P60852 638 aa19.64■□□□□ 0.73
CPNE1-223ENST00000475146 CRIP3Q6Q6R5 217 aa19.64■□□□□ 0.73
CPNE1-223ENST00000475146 C17orf107Q6ZR85 190 aa19.64■□□□□ 0.73
CPNE1-223ENST00000475146 OR13C5Q8NGS8 318 aa19.64■□□□□ 0.73
CPNE1-223ENST00000475146 CHIAQ9BZP6 476 aa19.64■□□□□ 0.73
CPNE1-223ENST00000475146 SEBOXQ9HB31 216 aaPredicted RBP19.64■□□□□ 0.73
CPNE1-223ENST00000475146 PNMA8CA0A1B0GUJ8 204 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 SH2D1BO14796 132 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 IGHV4-59P01825 116 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 C21orf33P30042 268 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-223ENST00000475146 PPP3R1P63098 170 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 ACSM1Q08AH1 577 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 DMKNQ6E0U4 476 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-223ENST00000475146 ASPHD2Q6ICH7 369 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 HCP5Q6MZN7 132 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 ZNF529Q6P280 563 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 ZNF485Q8NCK3 441 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 OR52N4Q8NGI2 321 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 PPP1R35Q8TAP8 253 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms