RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 ZNF529Q6P280 563 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 FAM185AQ8N0U4 392 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 FGFRL1Q8N441 504 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 OR52N4Q8NGI2 321 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 ZNF418Q8TF45 676 aaPredicted RBP11.38□□□□□ -0.59
USF1-205ENST00000473969 WDFY2Q96P53 400 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 MS4A7Q9GZW8 240 aaPredicted RBP11.38□□□□□ -0.59
USF1-205ENST00000473969 TCF7L1Q9HCS4 588 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 EXOSC4Q9NPD3 245 aaKnown RBP11.38□□□□□ -0.59
USF1-205ENST00000473969 ING4Q9UNL4 249 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 FOXJ3Q9UPW0 622 aa11.38□□□□□ -0.59
USF1-205ENST00000473969 TRBV5-7A0A0A0MS05 114 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 TRBV23-1A0A0A0MS06 115 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 MEGF11A6BM72 1044 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 F8VVB4 439 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 F8VWA3 439 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 TCF21O43680 179 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 GPX5O75715 221 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 CSTBP04080 98 aaKnown RBP11.37□□□□□ -0.59
USF1-205ENST00000473969 TK1P04183 234 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 MAS1P04201 325 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 CALCBP10092 127 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 IGFBP3P17936 291 aaPredicted RBP11.37□□□□□ -0.59
USF1-205ENST00000473969 FSTP19883 344 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 GABRR1P24046 479 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 MAP2K4P45985 399 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 SCN1BQ07699 218 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 MLLT11Q13015 90 aaPredicted RBP11.37□□□□□ -0.59
USF1-205ENST00000473969 DOC2BQ14184 412 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 PDCD1Q15116 288 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 TBCEQ15813 527 aaPredicted RBP11.37□□□□□ -0.59
USF1-205ENST00000473969 RBMS3Q6XE24 437 aaKnown RBP11.37□□□□□ -0.59
USF1-205ENST00000473969 GDPD3Q7L5L3 318 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 ZNF367Q7RTV3 350 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 PRIMA1Q86XR5 153 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 JAGN1Q8N5M9 183 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 PXT1Q8NFP0 134 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 DACT3Q96B18 629 aaPredicted RBP11.37□□□□□ -0.59
USF1-205ENST00000473969 UPRTQ96BW1 309 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 ORAI1Q96D31 301 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 SNX22Q96L94 193 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 DERL3Q96Q80 235 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 MGLLQ99685 303 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 SLITRK2Q9H156 845 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 METTL9Q9H1A3 318 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 HMG20AQ9NP66 347 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 NOX4Q9NPH5 578 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 KPTNQ9Y664 436 aa11.37□□□□□ -0.59
USF1-205ENST00000473969 IGKV1-12A0A0C4DH73 117 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 hCG_1809904A0A1W2PP81 198 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 A0A1W2PPE2 198 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 A0A1W2PR64 198 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 A0A1W2PRV1 198 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 K7N7A8 449 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 GABRPO00591 440 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 ZNF780AO75290 641 aaPredicted RBP11.36□□□□□ -0.59
USF1-205ENST00000473969 HTR3BO95264 441 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 IGKV1D-12P01611 117 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 SFTPBP07988 381 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 ZNF44P15621 663 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 PSMA1P25786 263 aaKnown RBP11.36□□□□□ -0.59
USF1-205ENST00000473969 DUSP1P28562 367 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 PTGFRP43088 359 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 MTNR1BP49286 362 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 ZP1P60852 638 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 RPL31P62899 125 aaKnown RBP11.36□□□□□ -0.59
USF1-205ENST00000473969 TPBGQ13641 420 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 ZNF146Q15072 292 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 CEACAM19Q7Z692 300 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 LY6G5BQ8NDX9 201 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 C8orf46Q8TAG6 207 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 TMEM203Q969S6 136 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 NR1H4Q96RI1 486 aaPredicted RBP11.36□□□□□ -0.59
USF1-205ENST00000473969 SUCNR1Q9BXA5 334 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 SEBOXQ9HB31 216 aaPredicted RBP11.36□□□□□ -0.59
USF1-205ENST00000473969 LRRC42Q9Y546 428 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 ARHGAP32A7KAX9 2087 aa11.36□□□□□ -0.59
USF1-205ENST00000473969 IGHV3OR16-10A0A075B7F0 116 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 A0A0A6YYJ9 748 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 TRAV40A0A0B4J280 105 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 FUOMA2VDF0 154 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 DEGS1O15121 323 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 FCN3O75636 299 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 CPEP16870 476 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 OR3A4PP47883 348 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 EDDM3BP56851 147 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 BPIFB3P59826 476 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 GPR176Q14439 515 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 GRK1Q15835 563 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 HSD17B12Q53GQ0 312 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 ASPHD2Q6ICH7 369 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 RNF144BQ7Z419 303 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 CDH26Q8IXH8 852 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 OR8H2Q8N162 312 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 KIR3DL3Q8N743 410 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 NKAIN3Q8N8D7 197 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 OR4M1Q8NGD0 313 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 JMJD8Q96S16 334 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 ACOT13Q9NPJ3 140 aa11.35□□□□□ -0.59
USF1-205ENST00000473969 WNK2Q9Y3S1 2297 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms