RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SRPXP78539 464 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 TLE3Q04726 772 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 BAXQ07812 192 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 IL15RAQ13261 267 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF679Q8IYX0 411 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 POC1AQ8NBT0 407 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 OR4D11Q8NGI4 311 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 RPS4Y2Q8TD47 263 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 ADAMTS15Q8TE58 950 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 ASB10Q8WXI3 467 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 RASD2Q96D21 266 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 RBMXL1Q96E39 390 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 RARRES2Q99969 163 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 FAM110AQ9BQ89 295 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 MAGEH1Q9H213 219 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CXCL16Q9H2A7 254 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 Q9N2K0 584 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 RNF186Q9NXI6 227 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PPIAL4AQ9Y536 164 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 A0A087WUU8 490 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 NKX2-6A6NCS4 301 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 K7N7A8 449 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 RBMXL2O75526 392 aaKnown RBP4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 KLF8O95600 359 aaPredicted RBP4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 SMIM17P0DL12 118 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 EPORP19235 508 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 TIMP3P35625 211 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 PPP1CCP36873 323 aaKnown RBP4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 FOXL2P58012 376 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 CKS1BP61024 79 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF92Q03936 586 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 RAB30Q15771 203 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 AMZ1Q400G9 498 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 CCSMST1Q4G0I0 132 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 TCEAL5Q5H9L2 206 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC8B1Q6J4K2 584 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 RBM45Q8IUH3 476 aaKnown RBP4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 YAF2Q8IY57 180 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 CYB561D1Q8N8Q1 229 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 CHST4Q8NCG5 386 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 OR10S1Q8NGN2 331 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 OR13C9Q8NGT0 318 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC38A5Q8WUX1 472 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 OR10C1Q96KK4 312 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 OR6C1Q96RD1 312 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 NICN1Q9BSH3 213 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 ABHD6Q9BV23 337 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC25A18Q9H1K4 315 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 LAMP3Q9UQV4 416 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 RHBDD3Q9Y3P4 386 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 OR51B2Q9Y5P1 312 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 HYPMO75409 117 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 PRSS56P0CW18 603 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 CCL2P13500 99 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 CSRP1P21291 193 aaKnown RBP4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 CEACAM3P40198 252 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 FZD2Q14332 565 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 ICAM4Q14773 271 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 PLAC9Q5JTB6 97 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 C9orf50Q5SZB4 431 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 STAC2Q6ZMT1 411 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 C1orf174Q8IYL3 243 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 TCTEX1D1Q8N7M0 179 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF709Q8N972 641 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 FER1L6-AS1Q8NA97 138 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 C2orf15Q8WU43 125 aaKnown RBP4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 ASB5Q8WWX0 329 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 PELI1Q96FA3 418 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 SIGMAR1Q99720 223 aa4.47□□□□□ -1.69
TMEM39A-206ENST00000473684 TTC3P53804 2025 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 IGHV2-26A0A0B4J1V2 119 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 IGLC7A0M8Q6 106 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 OR11H12B2RN74 326 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 KLRC4-KLRK1H3BQV0 150 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 TRAF3IP2O43734 574 aaPredicted RBP4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 TRAPPC6AO75865 159 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 STK17BO94768 372 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 HBE1P02100 147 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 CTSEP14091 401 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 GNB3P16520 340 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 GDF1P27539 372 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 TSPOP30536 169 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 CYB561P49447 251 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 GNB2P62879 340 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 PDE7AQ13946 482 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 UPP1Q16831 310 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 TMEM128Q5BJH2 165 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 LRRC73Q5JTD7 316 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 STPG1Q5TH74 334 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 TMPRSS12Q86WS5 348 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 APOBEC3FQ8IUX4 373 aaKnown RBP4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 FAM219AQ8IW50 185 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 OR11H1Q8NG94 326 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 OR11H2Q8NH07 326 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 CMTM2Q8TAZ6 248 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 FAM213BQ8TBF2 198 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 GRAPLQ8TC17 118 aaPredicted RBP4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 IL22RA2Q969J5 263 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 NEURL3Q96EH8 262 aa4.46□□□□□ -1.69
TMEM39A-206ENST00000473684 SFRP2Q96HF1 295 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms