RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 CEBPDP49716 269 aaPredicted RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 GZMKP49863 264 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 GNG3P63215 75 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 DHRS2Q13268 280 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 PPP1R1AQ13522 171 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 SF3B4Q15427 424 aaKnown RBP eCLIP5.31□□□□□ -1.568e-9■■■■■ 52
CLK1-210ENST00000473565 CHRFAM7AQ494W8 412 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 PRAMEF6Q5VXH4 476 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 Q6ZR03 302 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 CCDC36Q8IYA8 594 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 ZBTB8BQ8NAP8 495 aaPredicted RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 RDH5Q92781 318 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 TECTBQ96PL2 329 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 PRRT1Q99946 306 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 ZNF436Q9C0F3 470 aaPredicted RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 OR51I2Q9H344 312 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 UFSP2Q9NUQ7 469 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 IL36GQ9NZH8 169 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 DUSP13Q9UII6 198 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 MPC1Q9Y5U8 109 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 ZFYVE26Q68DK2 2539 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 TRAV39A0A0B4J263 110 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 OR5H14A6NHG9 310 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 A8MXE2 369 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 G3V3Q6 166 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 GOSR2O14653 212 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 HLA-AP01891 365 aaKnown RBP5.3□□□□□ -1.56
CLK1-210ENST00000473565 C1QBP02746 253 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 IL5P05113 134 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 FCGR3AP08637 254 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 VAMP1P23763 118 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 MECP2P51608 486 aaKnown RBP5.3□□□□□ -1.56
CLK1-210ENST00000473565 H2BFSP57053 126 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 NAAAQ02083 359 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 ZNF154Q13106 437 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 MPPED2Q15777 294 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 FAM189A2Q15884 450 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 LAMTOR1Q6IAA8 161 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 MKXQ8IYA7 352 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 SCCPDHQ8NBX0 429 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 RELL2Q8NC24 303 aaPredicted RBP5.3□□□□□ -1.56
CLK1-210ENST00000473565 OR2T35Q8NGX2 323 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 NEK7Q8TDX7 302 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 SLC25A21Q9BQT8 299 aaPredicted RBP5.3□□□□□ -1.56
CLK1-210ENST00000473565 OPA3Q9H6K4 179 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 GPN1Q9HCN4 374 aaPredicted RBP5.3□□□□□ -1.56
CLK1-210ENST00000473565 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.3□□□□□ -1.565e-7■□□□□ 10.8
CLK1-210ENST00000473565 DLL4Q9NR61 685 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 PIPOXQ9P0Z9 390 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 ZNF107Q9UII5 783 aaPredicted RBP5.3□□□□□ -1.56
CLK1-210ENST00000473565 PURGQ9UJV8 347 aaKnown RBP5.3□□□□□ -1.56
CLK1-210ENST00000473565 ABCA4P78363 2273 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 ATP6V1G2-DDX39BF2Z307 99 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 WNT9BO14905 357 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 TIMM8AO60220 97 aaPredicted RBP5.3□□□□□ -1.56
CLK1-210ENST00000473565 RAC2P15153 192 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 FUT3P21217 361 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 ARPC4P59998 168 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 FGF12P61328 243 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 PPA1Q15181 289 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 OR8G1Q15617 311 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 SPRNQ5BIV9 151 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 AADACL3Q5VUY0 350 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 SLC22A25Q6T423 547 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 SEZ6L2Q6UXD5 910 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 FAM219AQ8IW50 185 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 OR2AK2Q8NG84 335 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 OR5AP2Q8NGF4 316 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 DEDD2Q8WXF8 326 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 SYT3Q9BQG1 590 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 SFXN3Q9BWM7 321 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 WDR13Q9H1Z4 485 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 PPA2Q9H2U2 334 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 C5orf66Q9H5L9 145 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 SLC2A8Q9NY64 477 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 HSPB11Q9Y547 144 aa5.3□□□□□ -1.56
CLK1-210ENST00000473565 ANKHD1Q8IWZ3 2542 aaKnown RBP5.29□□□□□ -1.56
CLK1-210ENST00000473565 MEX3AA1L020 520 aaKnown RBP5.29□□□□□ -1.56
CLK1-210ENST00000473565 OR5B21A6NL26 309 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 IQCF6A8MYZ5 107 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 CRHP06850 196 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 HOXB1P14653 301 aaPredicted RBP5.29□□□□□ -1.56
CLK1-210ENST00000473565 GLRA1P23415 457 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 VAX1Q5SQQ9 334 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 C11orf88Q6PI97 169 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 ZNF573Q86YE8 665 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 TERB2Q8NHR7 220 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 UBALD1Q8TB05 177 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 ZNF431Q8TF32 576 aaPredicted RBP5.29□□□□□ -1.56
CLK1-210ENST00000473565 TMEM246Q9BRR3 403 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 ZNF2Q9BSG1 426 aaPredicted RBP5.29□□□□□ -1.56
CLK1-210ENST00000473565 RTL8AQ9BWD3 113 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 CHMP1AQ9HD42 196 aaPredicted RBP5.29□□□□□ -1.56
CLK1-210ENST00000473565 ANXA10Q9UJ72 324 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 HSF4Q9ULV5 492 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 MGAT4AQ9UM21 535 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 IGSF10Q6WRI0 2623 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 TRGV8A0A0C4DH27 118 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 A6NLC8 198 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 SNRPGP15A8MWD9 76 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms