RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 TCF23Q7RTU1 214 aa15.94■□□□□ 0.14
COL9A3-210ENST00000472880 ENTHD1Q8IYW4 607 aa15.94■□□□□ 0.14
COL9A3-210ENST00000472880 LYG1Q8N1E2 194 aa15.94■□□□□ 0.14
COL9A3-210ENST00000472880 Q8N2B8 174 aa15.94■□□□□ 0.14
COL9A3-210ENST00000472880 PRSS35Q8N3Z0 413 aa15.94■□□□□ 0.14
COL9A3-210ENST00000472880 ZNF676Q8N7Q3 588 aa15.94■□□□□ 0.14
COL9A3-210ENST00000472880 OR8J1Q8NGP2 316 aa15.94■□□□□ 0.14
COL9A3-210ENST00000472880 RFKQ969G6 155 aa15.94■□□□□ 0.14
COL9A3-210ENST00000472880 GABARAPL3Q9BY60 117 aa15.94■□□□□ 0.14
COL9A3-210ENST00000472880 PRSS22Q9GZN4 317 aa15.94■□□□□ 0.14
COL9A3-210ENST00000472880 CHST6Q9GZX3 395 aa15.94■□□□□ 0.14
COL9A3-210ENST00000472880 LINC00312Q9Y6C7 94 aa15.94■□□□□ 0.14
COL9A3-210ENST00000472880 IGHA1P01876 353 aa15.93■□□□□ 0.14
COL9A3-210ENST00000472880 POU3F4P49335 361 aa15.93■□□□□ 0.14
COL9A3-210ENST00000472880 ATP1B3P54709 279 aa15.93■□□□□ 0.14
COL9A3-210ENST00000472880 TMED1Q13445 227 aa15.93■□□□□ 0.14
COL9A3-210ENST00000472880 LDLRAD2Q5SZI1 272 aa15.93■□□□□ 0.14
COL9A3-210ENST00000472880 MINOS1Q5TGZ0 78 aa15.93■□□□□ 0.14
COL9A3-210ENST00000472880 TPRX1Q8N7U7 411 aa15.93■□□□□ 0.14
COL9A3-210ENST00000472880 OR4S1Q8NGB4 309 aa15.93■□□□□ 0.14
COL9A3-210ENST00000472880 NDNFQ8TB73 568 aa15.93■□□□□ 0.14
COL9A3-210ENST00000472880 RBFOX1Q9NWB1 397 aaKnown RBP15.93■□□□□ 0.14
COL9A3-210ENST00000472880 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.93■□□□□ 0.14
COL9A3-210ENST00000472880 IL36RNQ9UBH0 155 aa15.93■□□□□ 0.14
COL9A3-210ENST00000472880 SESN1Q9Y6P5 492 aa15.93■□□□□ 0.14
COL9A3-210ENST00000472880 MINOS1-NBL1R4GNA1 71 aa15.93■□□□□ 0.14
COL9A3-210ENST00000472880 DSCAML1Q8TD84 2053 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 TRBV2A0A0J9YWF9 115 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 CD28P10747 220 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 POLR2IP36954 125 aaKnown RBP15.92■□□□□ 0.14
COL9A3-210ENST00000472880 KIR3DL2P43630 455 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 DYNLT3P51808 116 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 CDC42P60953 191 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 ZNF91Q05481 1191 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 SLC34A1Q06495 639 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 TP53I3Q53FA7 332 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 KPRPQ5T749 579 aaPredicted RBP15.92■□□□□ 0.14
COL9A3-210ENST00000472880 TRAPPC6BQ86SZ2 158 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 C10orf67Q8IYJ2 551 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 DNAAF1Q8NEP3 725 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 EME1Q96AY2 570 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 SEBOXQ9HB31 216 aaPredicted RBP15.92■□□□□ 0.14
COL9A3-210ENST00000472880 GLS2Q9UI32 602 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 HILPDAQ9Y5L2 63 aa15.92■□□□□ 0.14
COL9A3-210ENST00000472880 IGHV2-26A0A0B4J1V2 119 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 ZNF20P17024 532 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 PRKACAP17612 351 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 BCL3P20749 454 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 SNU13P55769 128 aaKnown RBP15.91■□□□□ 0.14
COL9A3-210ENST00000472880 MTCP1P56278 107 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 ZNF85Q03923 595 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 TMEM244Q5VVB8 128 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 ZBTB49Q6ZSB9 765 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 NDUFA11Q86Y39 141 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 RDH10Q8IZV5 341 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 FAM58AQ8N1B3 248 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 OR52N4Q8NGI2 321 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 ADAT3Q96EY9 351 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-210ENST00000472880 CLEC7AQ9BXN2 247 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 TMEM133Q9H2Q1 129 aa15.91■□□□□ 0.14
COL9A3-210ENST00000472880 H3BUI4 141 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 MGST3O14880 152 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 XPNPEP2O43895 674 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 PSPNO60542 156 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 ALDOBP05062 364 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 ALPLP05186 524 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 OCM2P0CE71 109 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 OCMP0CE72 109 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-210ENST00000472880 PRKACBP22694 351 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 AZGP1P25311 298 aaKnown RBP15.9■□□□□ 0.14
COL9A3-210ENST00000472880 DUSP1P28562 367 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 VDAC2P45880 294 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-210ENST00000472880 NPBWR2P48146 333 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 ISL1P61371 349 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 EMX1Q04741 257 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-210ENST00000472880 SPIN3Q5JUX0 258 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 LHFPL2Q6ZUX7 228 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 OR4F17Q8NGA8 305 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 R3HDM4Q96D70 268 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 OR4F4Q96R69 305 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 OR5M11Q96RB7 305 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 IMPAD1Q9NX62 359 aa15.9■□□□□ 0.14
COL9A3-210ENST00000472880 PLXNB1O43157 2135 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 IGKV1-9A0A0C4DH69 117 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 EI24O14681 340 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 ENTPD6O75354 484 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 CALCBP10092 127 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 JUNBP17275 347 aaPredicted RBP15.89■□□□□ 0.13
COL9A3-210ENST00000472880 ATF1P18846 271 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 P2RX3P56373 397 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 IL18R1Q13478 541 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 ZNF146Q15072 292 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 UTS2BQ765I0 119 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 REC114Q7Z4M0 266 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 OR2G2Q8NGZ5 317 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 SPSB1Q96BD6 273 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 CITED2Q99967 270 aaPredicted RBP15.89■□□□□ 0.13
COL9A3-210ENST00000472880 MMP28Q9H239 520 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 S100A14Q9HCY8 104 aa15.89■□□□□ 0.13
COL9A3-210ENST00000472880 UBE2J1Q9Y385 318 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms