RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SNTG1Q9NSN8 517 aa7.59□□□□□ -1.19
SMC4-213ENST00000472282 NDUFB11Q9NX14 153 aa7.59□□□□□ -1.19
SMC4-213ENST00000472282 CKLFQ9UBR5 152 aa7.59□□□□□ -1.19
SMC4-213ENST00000472282 DNAJB11Q9UBS4 358 aa7.59□□□□□ -1.19
SMC4-213ENST00000472282 PCDHB10Q9UN67 800 aa7.59□□□□□ -1.19
SMC4-213ENST00000472282 SF3B6Q9Y3B4 125 aaKnown RBP7.59□□□□□ -1.19
SMC4-213ENST00000472282 KIAA2026Q5HYC2 2103 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 CCRL2O00421 344 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 GABRPO00591 440 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 MAGEB3O15480 346 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 ADAM20O43506 726 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 ANGPTL7O43827 346 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 NOS1APO75052 506 aaPredicted RBP7.58□□□□□ -1.2
SMC4-213ENST00000472282 GPX5O75715 221 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 NXPH2O95156 264 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 CYB5AP00167 134 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 TFF1P04155 84 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 MAS1P04201 325 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 MUC1P15941 1255 aaPredicted RBP7.58□□□□□ -1.2
SMC4-213ENST00000472282 PSMA1P25786 263 aaKnown RBP7.58□□□□□ -1.2
SMC4-213ENST00000472282 BDKRB2P30411 391 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 GABRA5P31644 462 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 TGFBR2P37173 567 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 HILS1P60008 231 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 ZP1P60852 638 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 FABP5Q01469 135 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 TRAM1Q15629 374 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 KISS1Q15726 138 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 KCNJ8Q15842 424 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 MICBQ29980 383 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 SMIM21Q3B7S5 101 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 STUMQ69YW2 141 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 UNQ9370/PRO34162Q6UXP9 181 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 ACP7Q6ZNF0 438 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 TMEM91Q6ZNR0 172 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 CEACAM19Q7Z692 300 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 SATL1Q86VE3 508 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 MKXQ8IYA7 352 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 ZDHHC22Q8N966 263 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 OR5T2Q8NGG2 359 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 MUL1Q969V5 352 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 TMIGD2Q96BF3 282 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 NEIL1Q96FI4 390 aaPredicted RBP7.58□□□□□ -1.2
SMC4-213ENST00000472282 CPNE2Q96FN4 548 aaPredicted RBP7.58□□□□□ -1.2
SMC4-213ENST00000472282 NRIP2Q9BQI9 281 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 TMEM138Q9NPI0 162 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 MTCH1Q9NZJ7 389 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 NLKQ9UBE8 527 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 CTSZQ9UBR2 303 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 MIOXQ9UGB7 285 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 FOXJ3Q9UPW0 622 aa7.58□□□□□ -1.2
SMC4-213ENST00000472282 A0A0A6YYJ9 748 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 IGKV1-12A0A0C4DH73 117 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 A0A1B0GW55 424 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 OR2AT4A6NND4 320 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 F8VVB4 439 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 F8VWA3 439 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 J3QLI3 93 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 IGKV1D-12P01611 117 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 ALDOBP05062 364 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 UCHL1P09936 223 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 DUX4L2P0CJ85 424 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 DUX4L3P0CJ86 424 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 DUX4L4P0CJ87 422 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 DUX4L5P0CJ88 424 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 DUX4L6P0CJ89 424 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 DUX4L7P0CJ90 424 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 SMIM18P0DKX4 95 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 BCL3P20749 454 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 CFPP27918 469 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 ZNF93P35789 620 aaPredicted RBP7.57□□□□□ -1.2
SMC4-213ENST00000472282 GABRA2P47869 451 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 OR3A4PP47883 348 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 NPBWR2P48146 333 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 ERVK11-1P61568 191 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 PDZK1IP1Q13113 114 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 IKZF1Q13422 519 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 HSD17B12Q53GQ0 312 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 ESCO2Q56NI9 601 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 KLF17Q5JT82 389 aaPredicted RBP7.57□□□□□ -1.2
SMC4-213ENST00000472282 SYT6Q5T7P8 510 aaPredicted RBP7.57□□□□□ -1.2
SMC4-213ENST00000472282 DUX4L9Q6RFH8 374 aaPredicted RBP7.57□□□□□ -1.2
SMC4-213ENST00000472282 NLRC3Q7RTR2 1065 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 BCL6BQ8N143 479 aaPredicted RBP7.57□□□□□ -1.2
SMC4-213ENST00000472282 JAGN1Q8N5M9 183 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 FAM216BQ8N7L0 139 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 OR8B3Q8NGG8 313 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 ZNF418Q8TF45 676 aaPredicted RBP7.57□□□□□ -1.2
SMC4-213ENST00000472282 TNFAIP8L1Q8WVP5 186 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 EMG1Q92979 244 aaKnown RBP7.57□□□□□ -1.2
SMC4-213ENST00000472282 CEP19Q96LK0 163 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 OR8B2Q96RD0 313 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 NR1H4Q96RI1 486 aaPredicted RBP7.57□□□□□ -1.2
SMC4-213ENST00000472282 CCL13Q99616 98 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 FAM192AQ9GZU8 254 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 PPIL3Q9H2H8 161 aaKnown RBP7.57□□□□□ -1.2
SMC4-213ENST00000472282 HES4Q9HCC6 221 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 SMURF1Q9HCE7 757 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 VCX3AQ9NNX9 186 aa7.57□□□□□ -1.2
SMC4-213ENST00000472282 RBFOX1Q9NWB1 397 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms