RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ORC6Q9Y5N6 252 aa18.22■□□□□ 0.51
C9orf3-213ENST00000471978 IGKV1-9A0A0C4DH69 117 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 DAPL1A0PJW8 107 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 VSIG10L2P0DP72 767 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 ZNF20P17024 532 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 BCL3P20749 454 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 PRKACBP22694 351 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 PEX2P28328 305 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 DUSP1P28562 367 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 GRK1Q15835 563 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 LDLRAD2Q5SZI1 272 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 FAM58AQ8N1B3 248 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 TPRX1Q8N7U7 411 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 OR52N4Q8NGI2 321 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 RPS4Y2Q8TD47 263 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 CFHR4Q92496 578 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 FGGYQ96C11 551 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 CDCA4Q9BXL8 241 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 FRRS1LQ9P0K9 344 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 TCF19Q9Y242 345 aa18.21■□□□□ 0.51
C9orf3-213ENST00000471978 TRBV2A0A0J9YWF9 115 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 J3QRE1 110 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 ISG15P05161 165 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 ALPLP05186 524 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 CALCBP10092 127 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 ATF1P18846 271 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 AZGP1P25311 298 aaKnown RBP18.2■□□□□ 0.5
C9orf3-213ENST00000471978 OR12D2P58182 307 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 ACTA2P62736 377 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 ACTG2P63267 376 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 ZNF91Q05481 1191 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 CCBE1Q6UXH8 406 aaPredicted RBP18.2■□□□□ 0.5
C9orf3-213ENST00000471978 UTS2BQ765I0 119 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 HRASLS5Q96KN8 279 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 LINC00312Q9Y6C7 94 aa18.2■□□□□ 0.5
C9orf3-213ENST00000471978 DSCAML1Q8TD84 2053 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 A6NDX4 124 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 SLC16A6O15403 523 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 PSPNO60542 156 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 PRKACAP17612 351 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 SNU13P55769 128 aaKnown RBP18.19■□□□□ 0.5
C9orf3-213ENST00000471978 NANOS3P60323 173 aaKnown RBP18.19■□□□□ 0.5
C9orf3-213ENST00000471978 SNRPGP62308 76 aaKnown RBP18.19■□□□□ 0.5
C9orf3-213ENST00000471978 ZNF146Q15072 292 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 SLC25A30Q5SVS4 291 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 MEDAGQ5VYS4 303 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 FDX2Q6P4F2 183 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 LHFPL2Q6ZUX7 228 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 TMEM219Q86XT9 240 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 ZNF676Q8N7Q3 588 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 ZNF702PQ9H963 129 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 GLS2Q9UI32 602 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 PITPNC1Q9UKF7 332 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 SESN1Q9Y6P5 492 aa18.19■□□□□ 0.5
C9orf3-213ENST00000471978 EI24O14681 340 aa18.18■□□□□ 0.5
C9orf3-213ENST00000471978 HTR1AP08908 422 aa18.18■□□□□ 0.5
C9orf3-213ENST00000471978 OCM2P0CE71 109 aa18.18■□□□□ 0.5
C9orf3-213ENST00000471978 OCMP0CE72 109 aaPredicted RBP18.18■□□□□ 0.5
C9orf3-213ENST00000471978 PDZK1IP1Q13113 114 aa18.18■□□□□ 0.5
C9orf3-213ENST00000471978 HABP2Q14520 560 aaPredicted RBP18.18■□□□□ 0.5
C9orf3-213ENST00000471978 ZIK1Q3SY52 487 aaPredicted RBP18.18■□□□□ 0.5
C9orf3-213ENST00000471978 SPIN3Q5JUX0 258 aa18.18■□□□□ 0.5
C9orf3-213ENST00000471978 OR4S1Q8NGB4 309 aa18.18■□□□□ 0.5
C9orf3-213ENST00000471978 SPSB1Q96BD6 273 aa18.18■□□□□ 0.5
C9orf3-213ENST00000471978 OPALINQ96PE5 141 aa18.18■□□□□ 0.5
C9orf3-213ENST00000471978 MBOAT4Q96T53 435 aa18.18■□□□□ 0.5
C9orf3-213ENST00000471978 IGHV2-26A0A0B4J1V2 119 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 J3QLW9 94 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 MGST3O14880 152 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 ZNF19P17023 458 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 CCR9P51686 369 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 TRAPPC6BQ86SZ2 158 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 Q8N2B8 174 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 ACBD7Q8N6N7 88 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 RFT1Q96AA3 541 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 TMEM133Q9H2Q1 129 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 HMG20AQ9NP66 347 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 SERTAD4Q9NUC0 356 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 HHLA2Q9UM44 414 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 HILPDAQ9Y5L2 63 aa18.17■□□□□ 0.5
C9orf3-213ENST00000471978 SNTNA6NMZ2 147 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 SIRPB1O00241 398 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 SH2D1BO14796 132 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 OR3A1P47881 315 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 ALDH3A2P51648 485 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 DYNLT3P51808 116 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 SLC34A1Q06495 639 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 MINOS1Q5TGZ0 78 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 OR51A4Q8NGJ6 313 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 OR13C3Q8NGS6 347 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 OR10AC1Q8NH08 325 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 NDNFQ8TB73 568 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 CLEC7AQ9BXN2 247 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 GSTK1Q9Y2Q3 226 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 MINOS1-NBL1R4GNA1 71 aa18.16■□□□□ 0.5
C9orf3-213ENST00000471978 H3BNX3 289 aa18.15■□□□□ 0.5
C9orf3-213ENST00000471978 F2RL2O00254 374 aa18.15■□□□□ 0.5
C9orf3-213ENST00000471978 OPN1MWP04001 364 aa18.15■□□□□ 0.5
C9orf3-213ENST00000471978 OPN1MW2P0DN77 364 aa18.15■□□□□ 0.5
C9orf3-213ENST00000471978 OPN1MW3P0DN78 364 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms