RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 OR51G1Q8NGK1 321 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 OR10R2Q8NGX6 335 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 OR13G1Q8NGZ3 307 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 ZFAND1Q8TCF1 268 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 C11orf40Q8WZ69 217 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 RDH5Q92781 318 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 FRAT1Q92837 279 aaPredicted RBP3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 TMEM54Q969K7 222 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 YIPF5Q969M3 257 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 PPCDCQ96CD2 204 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 SMIM12Q96EX1 92 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 PIK3IP1Q96FE7 263 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 ZNF285Q96NJ3 590 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 CMSS1Q9BQ75 279 aaKnown RBP3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 TAPBPLQ9BX59 468 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 ARV1Q9H2C2 271 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 TXNIPQ9H3M7 391 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 NMNAT1Q9HAN9 279 aaPredicted RBP3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 SH2D2AQ9NP31 389 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 MIEF1Q9NQG6 463 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 TAS2R1Q9NYW7 299 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 RAB22AQ9UL26 194 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 MOKQ9UQ07 419 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 FAM32AQ9Y421 112 aaKnown RBP3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 HSPB11Q9Y547 144 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 NUBP2Q9Y5Y2 271 aa3.48□□□□□ -1.85
PRPF40A-206ENST00000471167 IGKV1D-8A0A087WSZ0 117 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 TRAV9-2A0A087WT02 112 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 A0A087WUJ7 227 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 A0A0G2JLM5 398 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 TRABD2BA6NFA1 517 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 EVPLLA8MZ36 301 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 E9PLD3 99 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 KPNA4O00629 521 aaPredicted RBP3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 BHLHE40O14503 412 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 CDX4O14627 284 aaPredicted RBP3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 SLC25A27O95847 323 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 GPR6P46095 362 aaPredicted RBP3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 APOC4P55056 127 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 RAB2AP61019 212 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 IGLV3-21P80748 117 aaPredicted RBP3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 IRF4Q15306 451 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 RPL13AP3Q6NVV1 102 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 CBR4Q8N4T8 237 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 OR4F15Q8NGB8 312 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 TMEM230Q96A57 120 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 HAUS1Q96CS2 278 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 KIFC1Q9BW19 673 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 TM2D1Q9BX74 207 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 FBXL15Q9H469 300 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 ENY2Q9NPA8 101 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 OPTCQ9UBM4 332 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 ANXA10Q9UJ72 324 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 DKKL1Q9UK85 242 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 SLC35A3Q9Y2D2 325 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 ASB4Q9Y574 426 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 PLEKHG1Q9ULL1 1385 aa3.47□□□□□ -1.85
PRPF40A-206ENST00000471167 FOXI3A8MTJ6 420 aaPredicted RBP3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 TRIM49D1C9J1S8 452 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 ATP6V1G2-DDX39BF2Z307 99 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 F8W036 122 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 H7C1H1 209 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 ATG12O94817 140 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 LY6G6DO95868 133 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 MT-CO2P00403 227 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 IGHV3-9P01782 118 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 SERPINA7P05543 415 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 HPNP05981 417 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 SLC35G6P0C7Q6 338 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 C1GALT1C1LP0DN25 315 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 HIST1H1TP22492 207 aaPredicted RBP3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 SPRP35270 261 aaPredicted RBP3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 PPICP45877 212 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 RND2P52198 227 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 TCTAP57738 103 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 PFN3P60673 137 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 NRF1Q16656 503 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 LRRC36Q1X8D7 754 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 KLHL12Q53G59 568 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 TMEM215Q68D42 235 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 OR10K2Q6IF99 312 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 ZFP1Q6P2D0 407 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 CNIH2Q6PI25 160 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 IDO2Q6ZQW0 420 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 GALNT10Q86SR1 603 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 EIF4E3Q8N5X7 224 aaKnown RBP3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 OR10G9Q8NGN4 311 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 GRPEL2Q8TAA5 225 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 NT5CQ8TCD5 201 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 SLC37A2Q8TED4 501 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 TBX5Q99593 518 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 ARHGDIGQ99819 225 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 DCSTAMPQ9H295 470 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 SPNS1Q9H2V7 528 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 RBM22Q9NW64 420 aaKnown RBP eCLIP3.46□□□□□ -1.865e-7■■■■□ 21.4
PRPF40A-206ENST00000471167 DNAJC27Q9NZQ0 273 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 DOK5Q9P104 306 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 ST3GAL6Q9Y274 331 aa3.46□□□□□ -1.86
PRPF40A-206ENST00000471167 UTP11Q9Y3A2 253 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms