RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 WDR19Q8NEZ3 1342 aa1.85□□□□□ -2.11
SSB-209ENST00000470621 IGKV1D-37A0A075B6S9 117 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 LOC100653049A0A140TA62 436 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 LEUTXA8MZ59 168 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 F5H5P2 479 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 SLC31A1O15431 190 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 KRT34O76011 436 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 PLEKHA8P1O95397 391 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 GZMAP12544 262 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 DEFB103AP81534 67 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 TMCO2Q7Z6W1 182 aaPredicted RBP1.84□□□□□ -2.11
SSB-209ENST00000470621 MSRB3Q8IXL7 192 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 RAD51AP1Q96B01 352 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 COA1Q9GZY4 146 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 SLC7A11Q9UPY5 501 aa1.84□□□□□ -2.11
SSB-209ENST00000470621 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 M0R1B8 84 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 PSIP1O75475 530 aaKnown RBP1.83□□□□□ -2.12
SSB-209ENST00000470621 IGKV1-16P04430 117 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 IVDP26440 423 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 BCAP31P51572 246 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 IFFO1Q0D2I5 559 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 ZNF773Q6PK81 442 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 C22orf15Q8WYQ4 148 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 PEX13Q92968 403 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 QKIQ96PU8 341 aaKnown RBP eCLIP1.83□□□□□ -2.121e-6■■□□□ 13.1
SSB-209ENST00000470621 BLZF1Q9H2G9 400 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 RBM12B-AS1Q9P1G2 102 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 CFL2Q9Y281 166 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 KPTNQ9Y664 436 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 ICE1Q9Y2F5 2266 aa1.83□□□□□ -2.12
SSB-209ENST00000470621 A6NED7 52 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 NCF1BA6NI72 391 aaPredicted RBP1.82□□□□□ -2.12
SSB-209ENST00000470621 NCF1CA8MVU1 366 aaPredicted RBP1.82□□□□□ -2.12
SSB-209ENST00000470621 RLN2P04090 185 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 CTLA4P16410 223 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 ZNF22P17026 224 aaPredicted RBP1.82□□□□□ -2.12
SSB-209ENST00000470621 P2RY2P41231 377 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 TOMM34Q15785 309 aaPredicted RBP1.82□□□□□ -2.12
SSB-209ENST00000470621 ATP6V1FQ16864 119 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 NDUFAF6Q330K2 333 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 OTUD6AQ7L8S5 288 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 DPPA2Q7Z7J5 298 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 FBXO36Q8NEA4 188 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 OR52K2Q8NGK3 314 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 CHID1Q9BWS9 393 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 ZNF436Q9C0F3 470 aaPredicted RBP1.82□□□□□ -2.12
SSB-209ENST00000470621 SLC38A1Q9H2H9 487 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 KIR3DX1Q9H7L2 352 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 RHOFQ9HBH0 211 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 OR5V1Q9UGF6 321 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 TTC41PQ6P2S7 1318 aa1.82□□□□□ -2.12
SSB-209ENST00000470621 G3V3Q6 166 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 GYG2O15488 501 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 SLC37A4O43826 429 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 COX7A2P2O60397 106 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 RALBP11234 206 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 TAC1P20366 129 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 CRABP2P29373 138 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 COILP38432 576 aaPredicted RBP1.81□□□□□ -2.12
SSB-209ENST00000470621 FOXF1Q12946 379 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 DUPD1Q68J44 220 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 MAL2Q969L2 176 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 OR8B2Q96RD0 313 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 IL22Q9GZX6 179 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
SSB-209ENST00000470621 LCTP09848 1927 aa1.81□□□□□ -2.12
SSB-209ENST00000470621 H7C2Y5 167 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 HMMRO75330 724 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 LIPCP11150 499 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 MLNP12872 115 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 M6PRP20645 277 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 HTR2BP41595 481 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 SPAG1Q07617 926 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 DYNC1I2Q13409 638 aaKnown RBP1.8□□□□□ -2.12
SSB-209ENST00000470621 BCL2A1Q16548 175 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 TTMPQ5BVD1 217 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 SYT6Q5T7P8 510 aaPredicted RBP1.8□□□□□ -2.12
SSB-209ENST00000470621 ASCL4Q6XD76 172 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 Q6ZS52 159 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 NELFCDQ8IXH7 590 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 HS3ST5Q8IZT8 346 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 ZNF567Q8N184 647 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 OR5T3Q8NGG3 340 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 LMX1AQ8TE12 382 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 KIAA1143Q96AT1 154 aaPredicted RBP1.8□□□□□ -2.12
SSB-209ENST00000470621 RILPQ96NA2 401 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 YPEL4Q96NS1 127 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 C12orf4Q9NQ89 552 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 CHRAC1Q9NRG0 131 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 MRPL16Q9NX20 251 aaKnown RBP1.8□□□□□ -2.12
SSB-209ENST00000470621 FADS3Q9Y5Q0 445 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 NEURL4Q96JN8 1562 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 ADAMTSL3P82987 1691 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 SHANK3Q9BYB0 1731 aa1.8□□□□□ -2.12
SSB-209ENST00000470621 TRAV8-7A0A075B6U6 113 aa1.79□□□□□ -2.12
SSB-209ENST00000470621 OR2AT4A6NND4 320 aa1.79□□□□□ -2.12
SSB-209ENST00000470621 ALOX12BO75342 701 aa1.79□□□□□ -2.12
SSB-209ENST00000470621 HLA-AP01891 365 aaKnown RBP1.79□□□□□ -2.12
SSB-209ENST00000470621 P0DMU3 169 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms