RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 C21orf33P30042 268 aaPredicted RBP11.59□□□□□ -0.55
TOP3B-215ENST00000470338 SOX2P48431 317 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 ZP1P60852 638 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 GUCA2AQ02747 115 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 BLMHQ13867 455 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 SPIN3Q5JUX0 258 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 C6orf141Q5SZD1 244 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 C17orf107Q6ZR85 190 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 AHSA2Q719I0 299 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 PDZD9Q8IXQ8 264 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 FAM185AQ8N0U4 392 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 STX19Q8N4C7 294 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 C11orf42Q8N5U0 333 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 ZSCAN4Q8NAM6 433 aaPredicted RBP11.59□□□□□ -0.55
TOP3B-215ENST00000470338 OR5D13Q8NGL4 314 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 GHSRQ92847 366 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 SNX22Q96L94 193 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 DUX5Q96PT3 197 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 HMG20AQ9NP66 347 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 IL36RNQ9UBH0 155 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 KIAA2026Q5HYC2 2103 aa11.59□□□□□ -0.55
TOP3B-215ENST00000470338 TRBV5-5A0A0J9YX44 114 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 A0A1W2PPH5 198 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 TMEM82A0PJX8 343 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 HOXA3O43365 443 aaPredicted RBP11.58□□□□□ -0.56
TOP3B-215ENST00000470338 HAND1O96004 215 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 HCKP08631 526 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 PRKACAP17612 351 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 RAB3AP20336 220 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 UBE2E1P51965 193 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 DLX1P56177 255 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 RPS11P62280 158 aaKnown RBP eCLIP11.58□□□□□ -0.562e-6■■□□□ 11.5
TOP3B-215ENST00000470338 ACTG1P63261 375 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 RNLSQ5VYX0 342 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 NCR3LG1Q68D85 454 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 FIP1L1Q6UN15 594 aaKnown RBP11.58□□□□□ -0.56
TOP3B-215ENST00000470338 OR8H2Q8N162 312 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 NANOGP1Q8N7R0 232 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 ASCC1Q8N9N2 400 aaKnown RBP11.58□□□□□ -0.56
TOP3B-215ENST00000470338 OR4M1Q8NGD0 313 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 OR5D18Q8NGL1 313 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 GCDHQ92947 438 aaPredicted RBP11.58□□□□□ -0.56
TOP3B-215ENST00000470338 ZDHHC16Q969W1 377 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 TMEM106AQ96A25 262 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 SLC25A28Q96A46 364 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 PGLYRP3Q96LB9 341 aa11.58□□□□□ -0.56
TOP3B-215ENST00000470338 A0A0U1RQK1 487 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 ALDOBP05062 364 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 CD1AP06126 327 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 MELTFP08582 738 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 TMEM225BP0DP42 221 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 HKR1P10072 659 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 CALCBP10092 127 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 LMO1P25800 156 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 DUSP1P28562 367 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 DLX6P56179 175 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 WNT4P56705 351 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 TAS2R43P59537 309 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 PRB3Q04118 309 aaPredicted RBP11.57□□□□□ -0.56
TOP3B-215ENST00000470338 KLRD1Q13241 179 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 YIF1BQ5BJH7 314 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 HCP5Q6MZN7 132 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 TMEM86BQ8N661 226 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 OR52N4Q8NGI2 321 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 OR51A2Q8NGJ7 313 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 TAS2R4Q9NYW5 299 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 GLS2Q9UI32 602 aa11.57□□□□□ -0.56
TOP3B-215ENST00000470338 C17orf98A8MV24 154 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 SH2D1BO14796 132 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 NPFFO15130 113 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 MAGEB3O15480 346 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 PSPNO60542 156 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 GPX5O75715 221 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 CDK1P06493 297 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 CCL3L1P16619 93 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 MYF6P23409 242 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 EEF1B2P24534 225 aaKnown RBP11.56□□□□□ -0.56
TOP3B-215ENST00000470338 MEF2CQ06413 473 aaPredicted RBP11.56□□□□□ -0.56
TOP3B-215ENST00000470338 ACSM1Q08AH1 577 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 DOC2BQ14184 412 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 ZNF273Q14593 569 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 Q499Y3 187 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 ELP2Q6IA86 826 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 C16orf87Q6PH81 154 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 C12orf54Q6X4T0 127 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 ASCL4Q6XD76 172 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 GDPD3Q7L5L3 318 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 LDLRAD3Q86YD5 345 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 ZFP41Q8N8Y5 198 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 PXT1Q8NFP0 134 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 OR13C5Q8NGS8 318 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 CPNE2Q96FN4 548 aaPredicted RBP11.56□□□□□ -0.56
TOP3B-215ENST00000470338 CDCA4Q9BXL8 241 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 ANKRD60Q9BZ19 345 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 VCX3BQ9H321 246 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 TMEM138Q9NPI0 162 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 ERGIC3Q9Y282 383 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 GSTK1Q9Y2Q3 226 aa11.56□□□□□ -0.56
TOP3B-215ENST00000470338 SF3B6Q9Y3B4 125 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms