RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 CEP19Q96LK0 163 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 NEDD4LQ96PU5 975 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 LIME1Q9H400 295 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 KCNK15Q9H427 330 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 AURKAIP1Q9NWT8 199 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-208ENST00000470268 TBC1D24Q9ULP9 559 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 FOXJ3Q9UPW0 622 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 GSTK1Q9Y2Q3 226 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 PEX16Q9Y5Y5 336 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 LRBAP50851 2863 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 LRRK2Q5S007 2527 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 SPTAN1Q13813 2472 aaKnown RBP3.99□□□□□ -1.77
SF3B1-208ENST00000470268 FAM230AA0A1W2PPH8 454 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 A0A1W2PQ09 198 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 ANKRD30BLA7E2S9 258 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 SPRY3O43610 288 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 LANCL1O43813 399 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 IGHV1-46P01743 117 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 RAB3AP20336 220 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 BDKRB2P30411 391 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 EVX1P49640 407 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 GPM6AP51674 278 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF154Q13106 437 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 MPPED2Q15777 294 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 TRIM16LQ309B1 348 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 CEACAM21Q3KPI0 293 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 FAM76BQ5HYJ3 339 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 SPANXN2Q5MJ10 180 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 PLCXD3Q63HM9 321 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 FAM166AQ6J272 317 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 SFXN4Q6P4A7 337 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 CNIH2Q6PI25 160 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 FAM131AQ6UXB0 335 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 PAMR1Q6UXH9 720 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 C1QL2Q7Z5L3 287 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 DTX2Q86UW9 622 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 C11orf53Q8IXP5 236 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 ZDHHC23Q8IYP9 409 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF611Q8N823 705 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 POC5Q8NA72 575 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 OR2Z1Q8NG97 314 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 OR8H1Q8NGG4 311 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 OR4D6Q8NGJ1 314 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 OR5D18Q8NGL1 313 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 OR13G1Q8NGZ3 307 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 IGFBPL1Q8WX77 278 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 RFT1Q96AA3 541 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 CYYR1Q96J86 154 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 NEURL2Q9BR09 285 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 ADAT1Q9BUB4 502 aaKnown RBP3.99□□□□□ -1.77
SF3B1-208ENST00000470268 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 SRRQ9GZT4 340 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 UBTD1Q9HAC8 227 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 TMEM138Q9NPI0 162 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 TMEM100Q9NV29 134 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 LAMP3Q9UQV4 416 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 MPC1Q9Y5U8 109 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 A3GALT2U3KPV4 340 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 USP9YO00507 2555 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-208ENST00000470268 CELSR2Q9HCU4 2923 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 GCN1Q92616 2671 aaKnown RBP3.98□□□□□ -1.77
SF3B1-208ENST00000470268 IGKV1-12A0A0C4DH73 117 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 A0A0G2JMP0 313 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 A0A0X1KG70 313 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 PQLC2LA1A4F0 135 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 FABP12A6NFH5 140 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 C17orf100A8MU93 164 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF732B4DXR9 585 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 B9A039 149 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 M0R233 179 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 SYNGR1O43759 233 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 NDUFS7O75251 213 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 RHBDL1O75783 438 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 IGKV1D-12P01611 117 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 HCKP08631 526 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 CSF3P09919 207 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 PTHLHP12272 177 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 IL7P13232 177 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 RAB3BP20337 219 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 MYL9P24844 172 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 PMELP40967 661 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 ETV6P41212 452 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 RFX2P48378 723 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 EIF2B2P49770 351 aaKnown RBP3.98□□□□□ -1.77
SF3B1-208ENST00000470268 RBP2P50120 134 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF81P51508 661 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 SELENOVP59797 346 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 ARPC4P59998 168 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 ZP1P60852 638 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 PPP3R1P63098 170 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 CCL8P80075 99 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 TLE4Q04727 773 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 PMS2P11Q13670 270 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 OR8G1Q15617 311 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 KISS1Q15726 138 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 PYDC2Q56P42 97 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 HES5Q5TA89 166 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 DDI2Q5TDH0 399 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 PRAMEF6Q5VXH4 476 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 BTN2A1Q7KYR7 527 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms