RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 MFNGO00587 321 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 SOCS1O15524 211 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 IL7P13232 177 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 CHATP28329 748 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 BLVRBP30043 206 aaPredicted RBP10.75□□□□□ -0.69
TRAF4-208ENST00000469529 PRSS3P35030 304 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 SNRPD2P62316 118 aaKnown RBP10.75□□□□□ -0.69
TRAF4-208ENST00000469529 TLE4Q04727 773 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 TAF9Q16594 264 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 PLAC9Q5JTB6 97 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 SHEQ5VZ18 495 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 C16orf87Q6PH81 154 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 SETD6Q8TBK2 473 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 ITLN1Q8WWA0 313 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 FCAMRQ8WWV6 532 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 HPS1Q92902 700 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 YIPF5Q969M3 257 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 SEH1LQ96EE3 360 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 NICN1Q9BSH3 213 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 RBFOX1Q9NWB1 397 aaKnown RBP10.75□□□□□ -0.69
TRAF4-208ENST00000469529 C1orf123Q9NWV4 160 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 RNF7Q9UBF6 113 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 MTFP1Q9UDX5 166 aa10.75□□□□□ -0.69
TRAF4-208ENST00000469529 A0A1W2PPR1 153 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 GEMIN2O14893 280 aaKnown RBP10.74□□□□□ -0.69
TRAF4-208ENST00000469529 PDCD6O75340 191 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 PLATP00750 562 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 KNG1P01042 644 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 COX6B1P14854 86 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 SCN1BQ07699 218 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 PRAMEF6Q5VXH4 476 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 Q6P435 159 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 FIP1L1Q6UN15 594 aaKnown RBP10.74□□□□□ -0.69
TRAF4-208ENST00000469529 ACP7Q6ZNF0 438 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 LYSMD2Q8IV50 215 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 GCSAMQ8N6F7 178 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 CHST4Q8NCG5 386 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 OR11L1Q8NGX0 322 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 IGFBPL1Q8WX77 278 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 TRIM63Q969Q1 353 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 NEDD4LQ96PU5 975 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 OCSTAMPQ9BR26 566 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 TRAF4Q9BUZ4 470 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-208ENST00000469529 PECRQ9BY49 303 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 DYNLRB1Q9NP97 96 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 DECR2Q9NUI1 292 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 TAS2R8Q9NYW2 309 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 TREM2Q9NZC2 230 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 ANAPC10Q9UM13 185 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 NPTNQ9Y639 398 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 CRYBG3Q68DQ2 2970 aa10.74□□□□□ -0.69
TRAF4-208ENST00000469529 CELSR2Q9HCU4 2923 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 A6NLC8 198 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 LRRC30A6NM36 301 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-208ENST00000469529 SH2D1BO14796 132 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 ORC5O43913 435 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 RBBP9O75884 186 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 NXPH2O95156 264 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 LPLP06858 475 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 GSTT2BP0CG30 244 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 MUC1P15941 1255 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-208ENST00000469529 NAT1P18440 290 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 GLRA1P23415 457 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 CBX5P45973 191 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 PAX5Q02548 391 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 DYRK1AQ13627 763 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 SRSF7Q16629 238 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAF4-208ENST00000469529 SMIM21Q3B7S5 101 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 PIGYQ3MUY2 71 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 SPRNQ5BIV9 151 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 ATPAF1Q5TC12 328 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-208ENST00000469529 TEX36Q5VZQ5 186 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 STEAP3Q658P3 488 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 ZNF826PQ6ZT77 177 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 MOGAT3Q86VF5 341 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 IZUMO1Q8IYV9 350 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 LRRC29Q8WV35 223 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 NEU4Q8WWR8 484 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-208ENST00000469529 EMG1Q92979 244 aaKnown RBP10.73□□□□□ -0.69
TRAF4-208ENST00000469529 ARHGAP5-AS1Q96IT6 56 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 RAB1BQ9H0U4 201 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 RIMS4Q9H426 269 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-208ENST00000469529 PLEKHF2Q9H8W4 249 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 UFSP2Q9NUQ7 469 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 PLEKHJ1Q9NW61 149 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 GLS2Q9UI32 602 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 PPP1R3CQ9UQK1 317 aa10.73□□□□□ -0.69
TRAF4-208ENST00000469529 CENPEQ02224 2701 aa10.72□□□□□ -0.69
TRAF4-208ENST00000469529 DEGS1O15121 323 aa10.72□□□□□ -0.69
TRAF4-208ENST00000469529 ECDO95905 644 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-208ENST00000469529 SOD3P08294 240 aa10.72□□□□□ -0.69
TRAF4-208ENST00000469529 PRKACAP17612 351 aa10.72□□□□□ -0.69
TRAF4-208ENST00000469529 KCNJ3P48549 501 aa10.72□□□□□ -0.69
TRAF4-208ENST00000469529 CCL8P80075 99 aa10.72□□□□□ -0.69
TRAF4-208ENST00000469529 DGCR2P98153 550 aa10.72□□□□□ -0.69
TRAF4-208ENST00000469529 ASAH1Q13510 395 aa10.72□□□□□ -0.69
TRAF4-208ENST00000469529 RBM39Q14498 530 aaKnown RBP10.72□□□□□ -0.69
TRAF4-208ENST00000469529 C20orf204Q6ZNR8 217 aa10.72□□□□□ -0.69
TRAF4-208ENST00000469529 SNX29P2Q8IUI4 249 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms