RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 PEX2P28328 305 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 DUSP1P28562 367 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 ATP1B3P54709 279 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 HABP2Q14520 560 aaPredicted RBP11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 ZNF146Q15072 292 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 PLA1AQ53H76 456 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 SLC25A30Q5SVS4 291 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 TMEM244Q5VVB8 128 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 UTS2BQ765I0 119 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 KCTD20Q7Z5Y7 419 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 Q8IYB0 196 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 ENTHD1Q8IYW4 607 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 FAM58AQ8N1B3 248 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 TPRX1Q8N7U7 411 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 OR4S1Q8NGB4 309 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 EMG1Q92979 244 aaKnown RBP11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 FGGYQ96C11 551 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 FOXRED1Q96CU9 486 aaPredicted RBP11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 ZNF714Q96N38 554 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 NKX3-1Q99801 234 aaPredicted RBP11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 RBFOX1Q9NWB1 397 aaKnown RBP11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 GNG8Q9UK08 70 aa11.92□□□□□ -0.5
SDCCAG3-209ENST00000468963 TRBV2A0A0J9YWF9 115 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 SAC3D1A6NKF1 404 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 FAM90A22PA8MWA6 464 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 G3V4G9 280 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 ENTPD6O75354 484 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 JUNBP17275 347 aaPredicted RBP11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 BCL3P20749 454 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 ERP29P30040 261 aaKnown RBP11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 MTCP1P56278 107 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 NANOS3P60323 173 aaKnown RBP11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 CDC42P60953 191 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 ACTA2P62736 377 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 ACTG2P63267 376 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 ACTC1P68032 377 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 ACTA1P68133 377 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 EDDM3AQ14507 147 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 CNN3Q15417 329 aaKnown RBP11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 GRK1Q15835 563 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 BEAN1Q3B7T3 259 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 KPRPQ5T749 579 aaPredicted RBP11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 MINOS1Q5TGZ0 78 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 TMEM219Q86XT9 240 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 RPS4Y2Q8TD47 263 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 HRASLS5Q96KN8 279 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 MBOAT4Q96T53 435 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 WNT10AQ9GZT5 417 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 CHST6Q9GZX3 395 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 ABCB10Q9NRK6 738 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 LINC00312Q9Y6C7 94 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 SESN1Q9Y6P5 492 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 MINOS1-NBL1R4GNA1 71 aa11.91□□□□□ -0.5
SDCCAG3-209ENST00000468963 IGKV1-12A0A0C4DH73 117 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 MGST3O14880 152 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 MMP23AO75900 390 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 IGKV1D-12P01611 117 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 CALCBP10092 127 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 PRKACBP22694 351 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 AZGP1P25311 298 aaKnown RBP11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 CCR9P51686 369 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 OR12D2P58182 307 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 SNRPGP62308 76 aaKnown RBP11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 BLCAPP62952 87 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 PDZK1IP1Q13113 114 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 DYNC1I2Q13409 638 aaKnown RBP11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 SAMD5Q5TGI4 173 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 Q6ZS46 218 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 RNF144BQ7Z419 303 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 PRSS22Q9GZN4 317 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 HMG20AQ9NP66 347 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 PITPNC1Q9UKF7 332 aa11.9□□□□□ -0.5
SDCCAG3-209ENST00000468963 IGHV2-26A0A0B4J1V2 119 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 SLC16A6O15403 523 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 CYB5AP00167 134 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 MT-ND2P03891 347 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 ALPLP05186 524 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 CD28P10747 220 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 GABRR1P24046 479 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 LMO1P25800 156 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 OR3A1P47881 315 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 EMX1Q04741 257 aaPredicted RBP11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 SPIN3Q5JUX0 258 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 LHFPL2Q6ZUX7 228 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 FAM220AQ7Z4H9 259 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 LYG1Q8N1E2 194 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 ZNF676Q8N7Q3 588 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 OR10AC1Q8NH08 325 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 CORO2AQ92828 525 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 SPSB1Q96BD6 273 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 RNFT2Q96EX2 444 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 TMEM133Q9H2Q1 129 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 EXOGQ9Y2C4 368 aaKnown RBP11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 UBE2J1Q9Y385 318 aaPredicted RBP11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 HILPDAQ9Y5L2 63 aa11.89□□□□□ -0.51
SDCCAG3-209ENST00000468963 DAPL1A0PJW8 107 aa11.88□□□□□ -0.51
SDCCAG3-209ENST00000468963 OR4C45A6NMZ5 311 aa11.88□□□□□ -0.51
SDCCAG3-209ENST00000468963 ADARB2-AS1A8MUL3 147 aa11.88□□□□□ -0.51
SDCCAG3-209ENST00000468963 PRKACAP17612 351 aa11.88□□□□□ -0.51
SDCCAG3-209ENST00000468963 POU3F4P49335 361 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms