RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 IL36RNQ9UBH0 155 aa16.12■□□□□ 0.17
SMC4-209ENST00000468653 FLVCR2Q9UPI3 526 aa16.12■□□□□ 0.17
SMC4-209ENST00000468653 IGLV3-9A0A075B6K5 115 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 A0A1B0GUH1 482 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 A0A1B0GWJ7 208 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 UBE2QL1A1L167 161 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 A6NLC8 198 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 AMY2BP19961 511 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 MAB21L1Q13394 359 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 IKZF1Q13422 519 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 NKPD1Q17RQ9 610 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 LINC00596Q86U02 117 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 SNAPC3Q92966 411 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 HDHD3Q9BSH5 251 aaPredicted RBP16.11■□□□□ 0.17
SMC4-209ENST00000468653 ZNF442Q9H7R0 627 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 NDRG3Q9UGV2 375 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 ZNF230Q9UIE0 474 aaPredicted RBP16.11■□□□□ 0.17
SMC4-209ENST00000468653 SCP2D1Q9UJQ7 156 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 ATP23Q9Y6H3 246 aa16.11■□□□□ 0.17
SMC4-209ENST00000468653 H3BUI4 141 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 ARPC1BO15143 372 aaKnown RBP16.1■□□□□ 0.17
SMC4-209ENST00000468653 TPD52L2O43399 206 aaKnown RBP16.1■□□□□ 0.17
SMC4-209ENST00000468653 PMP2P02689 132 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 IFNA6P05013 189 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 HNRNPCP07910 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
SMC4-209ENST00000468653 DUSP1P28562 367 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 DAZAP2Q15038 168 aaPredicted RBP16.1■□□□□ 0.17
SMC4-209ENST00000468653 SCGB2B2Q4G0G5 96 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 ACTBL2Q562R1 376 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 AKAP14Q86UN6 197 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 BEST4Q8NFU0 473 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 PRR7Q8TB68 274 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 CHAC2Q8WUX2 184 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 HPS1Q92902 700 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 MRPL37Q9BZE1 423 aaKnown RBP16.1■□□□□ 0.17
SMC4-209ENST00000468653 NPDC1Q9NQX5 325 aaPredicted RBP16.1■□□□□ 0.17
SMC4-209ENST00000468653 CA10Q9NS85 328 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 TAAR3PQ9P1P4 343 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 NBASA2RRP1 2371 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 PEX14O75381 377 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 NXPH2O95156 264 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 ZNF735P0CB33 412 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 PGA5P0DJD9 388 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 IL13RA2Q14627 380 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 PRAMEF6Q5VXH4 476 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 MAFIPQ8WZ33 124 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 GTF3AQ92664 365 aaKnown RBP16.1■□□□□ 0.17
SMC4-209ENST00000468653 MRPL24Q96A35 216 aaKnown RBP16.1■□□□□ 0.17
SMC4-209ENST00000468653 SLC6A7Q99884 636 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 NRIP2Q9BQI9 281 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 ESRP2Q9H6T0 727 aaKnown RBP16.1■□□□□ 0.17
SMC4-209ENST00000468653 KCNJ16Q9NPI9 418 aa16.1■□□□□ 0.17
SMC4-209ENST00000468653 PMELP40967 661 aa16.09■□□□□ 0.17
SMC4-209ENST00000468653 GMFBP60983 142 aa16.09■□□□□ 0.17
SMC4-209ENST00000468653 ERVK11-1P61568 191 aa16.09■□□□□ 0.17
SMC4-209ENST00000468653 SNTB1Q13884 538 aaKnown RBP16.09■□□□□ 0.17
SMC4-209ENST00000468653 MICBQ29980 383 aa16.09■□□□□ 0.17
SMC4-209ENST00000468653 IDO2Q6ZQW0 420 aa16.09■□□□□ 0.17
SMC4-209ENST00000468653 OR5H2Q8NGV7 314 aa16.09■□□□□ 0.17
SMC4-209ENST00000468653 DYRK2Q92630 601 aa16.09■□□□□ 0.17
SMC4-209ENST00000468653 DACT3Q96B18 629 aaPredicted RBP16.09■□□□□ 0.17
SMC4-209ENST00000468653 ELMOD3Q96FG2 381 aa16.09■□□□□ 0.17
SMC4-209ENST00000468653 PRRT1Q99946 306 aa16.09■□□□□ 0.17
SMC4-209ENST00000468653 BEX2Q9BXY8 128 aa16.09■□□□□ 0.17
SMC4-209ENST00000468653 BEX1Q9HBH7 125 aa16.09■□□□□ 0.17
SMC4-209ENST00000468653 UFSP2Q9NUQ7 469 aa16.09■□□□□ 0.17
SMC4-209ENST00000468653 HMX3A6NHT5 357 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 ZSCAN5BA6NJL1 495 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 C3orf80F5H4A9 247 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 ACAA1P09110 424 aaPredicted RBP16.08■□□□□ 0.17
SMC4-209ENST00000468653 DTYMKP23919 212 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 OR3A3P47888 321 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 TAS2R46P59540 309 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 MPPED2Q15777 294 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 ZNF826PQ6ZT77 177 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 C11orf53Q8IXP5 236 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 POC1AQ8NBT0 407 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 GIMAP1Q8WWP7 306 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 TLNRD1Q9H1K6 362 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 SPACA1Q9HBV2 294 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 EDARQ9UNE0 448 aa16.08■□□□□ 0.17
SMC4-209ENST00000468653 A0A0A6YYJ9 748 aa16.08■□□□□ 0.16
SMC4-209ENST00000468653 MCRIP1C9JLW8 97 aa16.08■□□□□ 0.16
SMC4-209ENST00000468653 SPRY3O43610 288 aa16.08■□□□□ 0.16
SMC4-209ENST00000468653 RLN1P04808 185 aa16.08■□□□□ 0.16
SMC4-209ENST00000468653 CHRFAM7AQ494W8 412 aa16.08■□□□□ 0.16
SMC4-209ENST00000468653 ADAM5Q6NVV9 412 aa16.08■□□□□ 0.16
SMC4-209ENST00000468653 LINC01560Q8TB33 94 aa16.08■□□□□ 0.16
SMC4-209ENST00000468653 NEK7Q8TDX7 302 aa16.08■□□□□ 0.16
SMC4-209ENST00000468653 SLC25A21Q9BQT8 299 aaPredicted RBP16.08■□□□□ 0.16
SMC4-209ENST00000468653 CHST6Q9GZX3 395 aa16.08■□□□□ 0.16
SMC4-209ENST00000468653 RCC2Q9P258 522 aaKnown RBP16.08■□□□□ 0.16
SMC4-209ENST00000468653 hCG_1807616A0A1W2PRN6 198 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 VSTM5A8MXK1 200 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 PYCARD-AS1I3L0S3 204 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 DEGS1O15121 323 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 PRAF2O60831 178 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 NOS1APO75052 506 aaPredicted RBP16.07■□□□□ 0.16
SMC4-209ENST00000468653 FCGR3AP08637 254 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 GRNP28799 593 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms