RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 OCMP0CE72 109 aaPredicted RBP13.94□□□□□ -0.18
SSBP1-207ENST00000468267 PIPP12273 146 aaPredicted RBP13.94□□□□□ -0.18
SSBP1-207ENST00000468267 CCL3L1P16619 93 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 DLX6P56179 175 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 ZNF273Q14593 569 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 TAF9Q16594 264 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 C17orf107Q6ZR85 190 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 OR8H2Q8N162 312 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 PACRGLQ8N7B6 248 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 OR13C9Q8NGT0 318 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 HAVCR2Q8TDQ0 301 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 AJUBAQ96IF1 538 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 SLITRK2Q9H156 845 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 ZCCHC4Q9H5U6 513 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 IL36RNQ9UBH0 155 aa13.94□□□□□ -0.18
SSBP1-207ENST00000468267 C17orf98A8MV24 154 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 CLIC3O95833 236 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 DCKP27707 260 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 ERVFRD-1P60508 538 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 ZNF146Q15072 292 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 RCN1Q15293 331 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 TTC23Q5W5X9 447 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 CRIP3Q6Q6R5 217 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 GDPGP1Q6ZNW5 385 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 GDPD3Q7L5L3 318 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 RNF144BQ7Z419 303 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 SERPINA12Q8IW75 414 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 PARP16Q8N5Y8 322 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 BEND2Q8NDZ0 799 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 OR5D14Q8NGL3 314 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 CNIH3Q8TBE1 160 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 C17orf50Q8WW18 174 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 CYGBQ8WWM9 190 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 RFT1Q96AA3 541 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 SPACA5Q96QH8 159 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 PDCD1LG2Q9BQ51 273 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 COMMD4Q9H0A8 199 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 NEK6Q9HC98 313 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 VPREB3Q9UKI3 123 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 WNK1Q9H4A3 2382 aa13.93□□□□□ -0.18
SSBP1-207ENST00000468267 IGKV1-12A0A0C4DH73 117 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 BTBD17A6NE02 478 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 IGKV1D-12P01611 117 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 ZNF728P0DKX0 622 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 CALCBP10092 127 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 PRKACAP17612 351 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 DUSP1P28562 367 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 ETV1P50549 477 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 GTF2A1P52655 376 aaPredicted RBP13.92□□□□□ -0.18
SSBP1-207ENST00000468267 EDDM3BP56851 147 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 ADARB1P78563 741 aaKnown RBP13.92□□□□□ -0.18
SSBP1-207ENST00000468267 MEF2CQ06413 473 aaPredicted RBP13.92□□□□□ -0.18
SSBP1-207ENST00000468267 SPIN3Q5JUX0 258 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 OLFML2AQ68BL7 652 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 SAXO1Q8IYX7 474 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 DHRSXQ8N5I4 330 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 OR5R1Q8NH85 324 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 HMG20AQ9NP66 347 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 GLS2Q9UI32 602 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 DHDHQ9UQ10 334 aa13.92□□□□□ -0.18
SSBP1-207ENST00000468267 IRGMA1A4Y4 181 aa13.91□□□□□ -0.18
SSBP1-207ENST00000468267 CLPSL1A2RUU4 121 aa13.91□□□□□ -0.18
SSBP1-207ENST00000468267 KDM4BO94953 1096 aa13.91□□□□□ -0.18
SSBP1-207ENST00000468267 RBP4P02753 201 aa13.91□□□□□ -0.18
SSBP1-207ENST00000468267 GABRR1P24046 479 aa13.91□□□□□ -0.18
SSBP1-207ENST00000468267 PEX2P28328 305 aa13.91□□□□□ -0.18
SSBP1-207ENST00000468267 CCDC58Q4VC31 144 aa13.91□□□□□ -0.18
SSBP1-207ENST00000468267 RPL22L1Q6P5R6 122 aaKnown RBP13.91□□□□□ -0.18
SSBP1-207ENST00000468267 TMPRSS11AQ6ZMR5 421 aa13.91□□□□□ -0.18
SSBP1-207ENST00000468267 ZSCAN4Q8NAM6 433 aaPredicted RBP13.91□□□□□ -0.18
SSBP1-207ENST00000468267 SETD9Q8NE22 299 aa13.91□□□□□ -0.18
SSBP1-207ENST00000468267 OR52N4Q8NGI2 321 aa13.91□□□□□ -0.18
SSBP1-207ENST00000468267 TSEN15Q8WW01 171 aaKnown RBP13.91□□□□□ -0.18
SSBP1-207ENST00000468267 MEGF9Q9H1U4 602 aa13.91□□□□□ -0.18
SSBP1-207ENST00000468267 RHOFQ9HBH0 211 aa13.91□□□□□ -0.18
SSBP1-207ENST00000468267 SH2D1BO14796 132 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 SULT1B1O43704 296 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 PSPNO60542 156 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 COX7A1P24310 79 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 SNU13P55769 128 aaKnown RBP13.9□□□□□ -0.18
SSBP1-207ENST00000468267 IL18R1Q13478 541 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 EDDM3AQ14507 147 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 KISS1Q15726 138 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 GRK1Q15835 563 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 XAF1Q6GPH4 301 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 ZNF782Q6ZMW2 699 aaPredicted RBP13.9□□□□□ -0.18
SSBP1-207ENST00000468267 TCF23Q7RTU1 214 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 OR4S1Q8NGB4 309 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 OR5D18Q8NGL1 313 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 RPS4Y2Q8TD47 263 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 WFDC12Q8WWY7 111 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 RGP1Q92546 391 aaPredicted RBP13.9□□□□□ -0.18
SSBP1-207ENST00000468267 SSX3Q99909 188 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 CHST6Q9GZX3 395 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 ZNF696Q9H7X3 374 aa13.9□□□□□ -0.18
SSBP1-207ENST00000468267 DIMT1Q9UNQ2 313 aaKnown RBP13.9□□□□□ -0.18
SSBP1-207ENST00000468267 MEGF8Q7Z7M0 2845 aa13.89□□□□□ -0.19
SSBP1-207ENST00000468267 hADV38S2A0JD32 116 aa13.89□□□□□ -0.19
SSBP1-207ENST00000468267 MEX3AA1L020 520 aaKnown RBP13.89□□□□□ -0.19
SSBP1-207ENST00000468267 MGST3O14880 152 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms