RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SERPINA3P01011 423 aa19.71■□□□□ 0.75
PTCH1-210ENST00000468211 CD28P10747 220 aa19.71■□□□□ 0.75
PTCH1-210ENST00000468211 POU3F4P49335 361 aa19.71■□□□□ 0.75
PTCH1-210ENST00000468211 CNN3Q15417 329 aaKnown RBP19.71■□□□□ 0.75
PTCH1-210ENST00000468211 GRK1Q15835 563 aa19.71■□□□□ 0.75
PTCH1-210ENST00000468211 SAMD5Q5TGI4 173 aa19.71■□□□□ 0.75
PTCH1-210ENST00000468211 RNF144BQ7Z419 303 aa19.71■□□□□ 0.75
PTCH1-210ENST00000468211 CCDC54Q8NEL0 328 aa19.71■□□□□ 0.75
PTCH1-210ENST00000468211 OR4S1Q8NGB4 309 aa19.71■□□□□ 0.75
PTCH1-210ENST00000468211 OR2G2Q8NGZ5 317 aa19.71■□□□□ 0.75
PTCH1-210ENST00000468211 CENPNQ96H22 339 aaPredicted RBP19.71■□□□□ 0.75
PTCH1-210ENST00000468211 CDCA4Q9BXL8 241 aa19.71■□□□□ 0.75
PTCH1-210ENST00000468211 SEBOXQ9HB31 216 aaPredicted RBP19.71■□□□□ 0.75
PTCH1-210ENST00000468211 HILPDAQ9Y5L2 63 aa19.71■□□□□ 0.75
PTCH1-210ENST00000468211 UBCP0CG48 685 aaKnown RBP19.7■□□□□ 0.74
PTCH1-210ENST00000468211 GABRR1P24046 479 aa19.7■□□□□ 0.74
PTCH1-210ENST00000468211 RBP2P50120 134 aa19.7■□□□□ 0.74
PTCH1-210ENST00000468211 SNU13P55769 128 aaKnown RBP19.7■□□□□ 0.74
PTCH1-210ENST00000468211 NANOS3P60323 173 aaKnown RBP19.7■□□□□ 0.74
PTCH1-210ENST00000468211 TMED1Q13445 227 aa19.7■□□□□ 0.74
PTCH1-210ENST00000468211 FAM220AQ7Z4H9 259 aa19.7■□□□□ 0.74
PTCH1-210ENST00000468211 FAM58AQ8N1B3 248 aa19.7■□□□□ 0.74
PTCH1-210ENST00000468211 DNAAF1Q8NEP3 725 aa19.7■□□□□ 0.74
PTCH1-210ENST00000468211 WIPF2Q8TF74 440 aaPredicted RBP19.7■□□□□ 0.74
PTCH1-210ENST00000468211 PP6455Q8WZ26 134 aa19.7■□□□□ 0.74
PTCH1-210ENST00000468211 FGGYQ96C11 551 aa19.7■□□□□ 0.74
PTCH1-210ENST00000468211 C10orf35Q96D05 121 aa19.7■□□□□ 0.74
PTCH1-210ENST00000468211 ABCB10Q9NRK6 738 aa19.7■□□□□ 0.74
PTCH1-210ENST00000468211 FRRS1LQ9P0K9 344 aa19.7■□□□□ 0.74
PTCH1-210ENST00000468211 LINC00312Q9Y6C7 94 aa19.7■□□□□ 0.74
PTCH1-210ENST00000468211 TRBV2A0A0J9YWF9 115 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 hADV38S2A0JD32 116 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 J3QRE1 110 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 ENTPD6O75354 484 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 PRB2P02812 416 aaPredicted RBP19.69■□□□□ 0.74
PTCH1-210ENST00000468211 ATF1P18846 271 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 ATP1B3P54709 279 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 NSUN5P1Q3KNT7 163 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 BAIAP2L2Q6UXY1 529 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 ZNF676Q8N7Q3 588 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 OR10AC1Q8NH08 325 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 RFKQ969G6 155 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 OR5M11Q96RB7 305 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 SESN1Q9Y6P5 492 aa19.69■□□□□ 0.74
PTCH1-210ENST00000468211 IGHV2-26A0A0B4J1V2 119 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 ADARB2-AS1A8MUL3 147 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 FBXO24O75426 580 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 PRKACAP17612 351 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 AZGP1P25311 298 aaKnown RBP19.68■□□□□ 0.74
PTCH1-210ENST00000468211 PEX2P28328 305 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 OR3A1P47881 315 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 DYNLT3P51808 116 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 MTCP1P56278 107 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 OR12D2P58182 307 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 BLCAPP62952 87 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 ZNF146Q15072 292 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 KPRPQ5T749 579 aaPredicted RBP19.68■□□□□ 0.74
PTCH1-210ENST00000468211 Q8IYB0 196 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 RFT1Q96AA3 541 aa19.68■□□□□ 0.74
PTCH1-210ENST00000468211 IGKV1-12A0A0C4DH73 117 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 IGKV1D-12P01611 117 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 RASSF2P50749 326 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 CDC42P60953 191 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 TMEM95Q3KNT9 176 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 TMEM244Q5VVB8 128 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 UTS2BQ765I0 119 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 ENTHD1Q8IYW4 607 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 DTX3Q8N9I9 347 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 OR51A4Q8NGJ6 313 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 PRSS22Q9GZN4 317 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 WNT10AQ9GZT5 417 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 MMP28Q9H239 520 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 TMEM133Q9H2Q1 129 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 AASSQ9UDR5 926 aa19.67■□□□□ 0.74
PTCH1-210ENST00000468211 SIRPB1O00241 398 aa19.66■□□□□ 0.74
PTCH1-210ENST00000468211 ISG15P05161 165 aa19.66■□□□□ 0.74
PTCH1-210ENST00000468211 SLC34A1Q06495 639 aa19.66■□□□□ 0.74
PTCH1-210ENST00000468211 PDZK1IP1Q13113 114 aa19.66■□□□□ 0.74
PTCH1-210ENST00000468211 MINOS1Q5TGZ0 78 aa19.66■□□□□ 0.74
PTCH1-210ENST00000468211 FDX2Q6P4F2 183 aa19.66■□□□□ 0.74
PTCH1-210ENST00000468211 RNFT2Q96EX2 444 aa19.66■□□□□ 0.74
PTCH1-210ENST00000468211 SPACA5Q96QH8 159 aa19.66■□□□□ 0.74
PTCH1-210ENST00000468211 MBOAT4Q96T53 435 aa19.66■□□□□ 0.74
PTCH1-210ENST00000468211 CITED2Q99967 270 aaPredicted RBP19.66■□□□□ 0.74
PTCH1-210ENST00000468211 HMG20AQ9NP66 347 aa19.66■□□□□ 0.74
PTCH1-210ENST00000468211 PITPNC1Q9UKF7 332 aa19.66■□□□□ 0.74
PTCH1-210ENST00000468211 MINOS1-NBL1R4GNA1 71 aa19.66■□□□□ 0.74
PTCH1-210ENST00000468211 F2RL2O00254 374 aa19.65■□□□□ 0.74
PTCH1-210ENST00000468211 MGST3O14880 152 aa19.65■□□□□ 0.74
PTCH1-210ENST00000468211 PRKACBP22694 351 aa19.65■□□□□ 0.74
PTCH1-210ENST00000468211 P2RX3P56373 397 aa19.65■□□□□ 0.74
PTCH1-210ENST00000468211 OR4P4Q8NGL7 312 aa19.65■□□□□ 0.74
PTCH1-210ENST00000468211 NDNFQ8TB73 568 aa19.65■□□□□ 0.74
PTCH1-210ENST00000468211 PYDC1Q8WXC3 89 aa19.65■□□□□ 0.74
PTCH1-210ENST00000468211 CLEC7AQ9BXN2 247 aa19.65■□□□□ 0.74
PTCH1-210ENST00000468211 IMPAD1Q9NX62 359 aa19.65■□□□□ 0.74
PTCH1-210ENST00000468211 GSTK1Q9Y2Q3 226 aa19.65■□□□□ 0.74
PTCH1-210ENST00000468211 DAPL1A0PJW8 107 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 FAM90A22PA8MWA6 464 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 E9PQ18 207 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms