RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 HCRTR1O43613 425 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 ZNF253O75346 499 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 REM1O75628 298 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 MOSP00540 346 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 IFNA1P01562 189 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 EIF4EP06730 217 aaKnown RBP2.76□□□□□ -1.97
VPS50-209ENST00000467326 CRHP06850 196 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 NBEAP1P0C6P0 100 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 OR5H8P0DN80 308 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 SCGB1A1P11684 91 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 RAB3BP20337 219 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 PAX6P26367 422 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 CRABP1P29762 137 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 FMO3P31513 532 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 MYCNOSP40205 109 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 PSMB2P49721 201 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 KLK7P49862 253 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 CRYBA4P53673 196 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 TCTAP57738 103 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 HIST1H3AP68431 136 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 SLC35A2P78381 396 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 H3F3AP84243 136 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 FMODQ06828 376 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 SKP2Q13309 424 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 OR1Q1Q15612 314 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 LRRC26Q2I0M4 334 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 ACSBG2Q5FVE4 666 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 BRMS1LQ5PSV4 323 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 CLEC12AQ5QGZ9 265 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 C1orf195Q5TG92 126 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 C1orf146Q5VVC0 180 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 OTPQ5XKR4 325 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 KCTD16Q68DU8 428 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 UFSP1Q6NVU6 142 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 SMARCD3Q6STE5 483 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 ZNF620Q6ZNG0 422 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 HIST2H3AQ71DI3 136 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 OR11H1Q8NG94 326 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 OR4M2Q8NGB6 313 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 OR51S1Q8NGJ8 323 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 OR11H2Q8NH07 326 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 OR10J5Q8NHC4 309 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 FLVCR1-AS1Q8TAF5 88 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 NEIL3Q8TAT5 605 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 LRRC29Q8WV35 223 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 RXFP2Q8WXD0 754 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 GEMIN6Q8WXD5 167 aaKnown RBP2.76□□□□□ -1.97
VPS50-209ENST00000467326 UCN3Q969E3 161 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 C12orf43Q96C57 262 aaKnown RBP2.76□□□□□ -1.97
VPS50-209ENST00000467326 PPCDCQ96CD2 204 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 DCUN1D1Q96GG9 259 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 ZNF414Q96IQ9 312 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 OR10C1Q96KK4 312 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 SUCNR1Q9BXA5 334 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 C20orf85Q9H1P6 137 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 OR51I1Q9H343 314 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 TXNIPQ9H3M7 391 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 TPK1Q9H3S4 243 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 FBXL15Q9H469 300 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 MYOZ1Q9NP98 299 aaPredicted RBP2.76□□□□□ -1.97
VPS50-209ENST00000467326 DDIT4Q9NX09 232 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 XCL2Q9UBD3 114 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 ZNF629Q9UEG4 869 aaPredicted RBP2.76□□□□□ -1.97
VPS50-209ENST00000467326 NDRG2Q9UN36 371 aaKnown RBP2.76□□□□□ -1.97
VPS50-209ENST00000467326 ZNF257Q9Y2Q1 563 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 FAM32AQ9Y421 112 aaKnown RBP2.76□□□□□ -1.97
VPS50-209ENST00000467326 ORC6Q9Y5N6 252 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 PTPRGP23470 1445 aa2.76□□□□□ -1.97
VPS50-209ENST00000467326 PCF11O94913 1555 aaKnown RBP2.75□□□□□ -1.97
VPS50-209ENST00000467326 TGIF2-C20orf24A0A0A6YYL0 155 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 IGHV3OR16-9A0A0B4J2B5 98 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 A0A0G2JRQ6 117 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 MIF4GDA9UHW6 222 aaKnown RBP2.75□□□□□ -1.97
VPS50-209ENST00000467326 H7C1H1 209 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 J3QT63 122 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 LAD1O00515 517 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 TBL1XO60907 577 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 PFDN1O60925 122 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 RP2O75695 350 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 C6orf47O95873 294 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 CTSLP07711 333 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 IL3P08700 152 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 LINC00614P0C842 121 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 GKN3PP0CG01 181 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 OR13C7P0DN81 318 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 CD79AP11912 226 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 CD1EP15812 388 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 HIST1H1TP22492 207 aaPredicted RBP2.75□□□□□ -1.97
VPS50-209ENST00000467326 IGHV1-2P23083 117 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 TSPOP30536 169 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 MPIP34949 423 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 VDAC2P45880 294 aaPredicted RBP2.75□□□□□ -1.97
VPS50-209ENST00000467326 ERFP50548 548 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 FGF8P55075 233 aaPredicted RBP2.75□□□□□ -1.97
VPS50-209ENST00000467326 TAS2R41P59536 307 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 TAS2R43P59537 309 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 HBG1P69891 147 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 HBG2P69892 147 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 PRDX1Q06830 199 aaKnown RBP2.75□□□□□ -1.97
VPS50-209ENST00000467326 LAMTOR4Q0VGL1 99 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms