RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 BCL2A1Q16548 175 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 ZNF404Q494X3 552 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 FAM27D1Q5T7N8 215 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 ULK3Q6PHR2 472 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 HS3ST5Q8IZT8 346 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 ZNF738Q8NE65 137 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 OR6K6Q8NGW6 343 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 NT5CQ8TCD5 201 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 LMX1AQ8TE12 382 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 C22orf15Q8WYQ4 148 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 TFGQ92734 400 aaPredicted RBP1.33□□□□□ -2.2
SMC4-207ENST00000467263 TSNAXQ99598 290 aaKnown RBP1.33□□□□□ -2.2
SMC4-207ENST00000467263 IQCGQ9H095 443 aaKnown RBP1.33□□□□□ -2.2
SMC4-207ENST00000467263 TUBA4BQ9H853 241 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 TUBG2Q9NRH3 451 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 TFR2Q9UP52 801 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 SLC7A11Q9UPY5 501 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 RHBDD3Q9Y3P4 386 aa1.33□□□□□ -2.2
SMC4-207ENST00000467263 CENPXA8MT69 81 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 AKR7A2O43488 359 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 TRAPPC6AO75865 159 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 OR5AL1P0C617 328 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 CTLA4P16410 223 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 ZNF83P51522 516 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 SLC35B1P78383 322 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 FOXF1Q12946 379 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 CST6Q15828 149 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 LYZL2Q7Z4W2 148 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 DPPA2Q7Z7J5 298 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 SETD3Q86TU7 594 aaPredicted RBP1.32□□□□□ -2.2
SMC4-207ENST00000467263 OR4K13Q8NH42 304 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 YPEL4Q96NS1 127 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 COA1Q9GZY4 146 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 DDIT4Q9NX09 232 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 OR5V1Q9UGF6 321 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 CFL2Q9Y281 166 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 FADS3Q9Y5Q0 445 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 AK9Q5TCS8 1911 aa1.32□□□□□ -2.2
SMC4-207ENST00000467263 A0A1W2PRF3 423 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 A0A1W2PRM7 423 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 SLC37A4O43826 429 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 RLN2P04090 185 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 GTF2F2P13984 249 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 HOXB8P17481 243 aaPredicted RBP1.31□□□□□ -2.2
SMC4-207ENST00000467263 TAC1P20366 129 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 HTR2BP41595 481 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 UBE2NLQ5JXB2 153 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 NOXRED1Q6NXP6 359 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 SLC35D2Q76EJ3 337 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 BBOF1Q8ND07 529 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 OR8K1Q8NGG5 319 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 OR51A7Q8NH64 312 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 QKIQ96PU8 341 aaKnown RBP eCLIP1.31□□□□□ -2.2
SMC4-207ENST00000467263 OR2M4Q96R27 311 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 TSGA10Q9BZW7 698 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 CHRNA10Q9GZZ6 450 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 LRRC19Q9H756 370 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 KIR3DX1Q9H7L2 352 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 ZNF286AQ9HBT8 521 aa1.31□□□□□ -2.2
SMC4-207ENST00000467263 H7C2Y5 167 aa1.3□□□□□ -2.2
SMC4-207ENST00000467263 HLA-AP01891 365 aaKnown RBP1.3□□□□□ -2.2
SMC4-207ENST00000467263 COILP38432 576 aaPredicted RBP1.3□□□□□ -2.2
SMC4-207ENST00000467263 RPL31P62899 125 aaKnown RBP1.3□□□□□ -2.2
SMC4-207ENST00000467263 IFFO1Q0D2I5 559 aa1.3□□□□□ -2.2
SMC4-207ENST00000467263 GPR176Q14439 515 aa1.3□□□□□ -2.2
SMC4-207ENST00000467263 TOMM34Q15785 309 aaPredicted RBP1.3□□□□□ -2.2
SMC4-207ENST00000467263 ATP6AP1LQ52LC2 224 aa1.3□□□□□ -2.2
SMC4-207ENST00000467263 TCF23Q7RTU1 214 aa1.3□□□□□ -2.2
SMC4-207ENST00000467263 MAL2Q969L2 176 aa1.3□□□□□ -2.2
SMC4-207ENST00000467263 MYCBPQ99417 103 aaPredicted RBP1.3□□□□□ -2.2
SMC4-207ENST00000467263 SHCBP1LQ9BZQ2 653 aa1.3□□□□□ -2.2
SMC4-207ENST00000467263 ZNF436Q9C0F3 470 aaPredicted RBP1.3□□□□□ -2.2
SMC4-207ENST00000467263 SLC38A1Q9H2H9 487 aa1.3□□□□□ -2.2
SMC4-207ENST00000467263 SDHAF3Q9NRP4 125 aa1.3□□□□□ -2.2
SMC4-207ENST00000467263 PLXNA3P51805 1871 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 OR2AT4A6NND4 320 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 M0R1B8 84 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 GYG2O15488 501 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 CRTAPO75718 401 aaPredicted RBP1.29□□□□□ -2.2
SMC4-207ENST00000467263 PLEKHA8P1O95397 391 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 OPN1SWP03999 348 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 S100A2P29034 98 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 CSKP41240 450 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 PSG4Q00888 419 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 GBE1Q04446 702 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 ATP6V1FQ16864 119 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 HIKESHIQ53FT3 197 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 IDNKQ5T6J7 187 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 SYT6Q5T7P8 510 aaPredicted RBP1.29□□□□□ -2.2
SMC4-207ENST00000467263 RNASE11Q8TAA1 199 aaKnown RBP1.29□□□□□ -2.2
SMC4-207ENST00000467263 PYURFQ96I23 114 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 RILPQ96NA2 401 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 ANP32EQ9BTT0 268 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 C12orf4Q9NQ89 552 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 RBM12B-AS1Q9P1G2 102 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 KMT2BQ9UMN6 2715 aaPredicted RBP1.29□□□□□ -2.2
SMC4-207ENST00000467263 SHANK3Q9BYB0 1731 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 GBF1Q92538 1859 aa1.29□□□□□ -2.2
SMC4-207ENST00000467263 LCTP09848 1927 aa1.28□□□□□ -2.2
SMC4-207ENST00000467263 ATG2BQ96BY7 2078 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms