RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ZNF676Q8N7Q3 588 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 OR52N4Q8NGI2 321 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 PP6455Q8WZ26 134 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 EME1Q96AY2 570 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 GABARAPL3Q9BY60 117 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 PRSS22Q9GZN4 317 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 RBFOX1Q9NWB1 397 aaKnown RBP15.44■□□□□ 0.06
COL9A3-206ENST00000466532 HILPDAQ9Y5L2 63 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 LINC00312Q9Y6C7 94 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 CYB5AP00167 134 aa15.43■□□□□ 0.06
COL9A3-206ENST00000466532 CD28P10747 220 aa15.43■□□□□ 0.06
COL9A3-206ENST00000466532 JUNBP17275 347 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-206ENST00000466532 DUSP1P28562 367 aa15.43■□□□□ 0.06
COL9A3-206ENST00000466532 NPBWR2P48146 333 aa15.43■□□□□ 0.06
COL9A3-206ENST00000466532 POU3F4P49335 361 aa15.43■□□□□ 0.06
COL9A3-206ENST00000466532 RBP2P50120 134 aa15.43■□□□□ 0.06
COL9A3-206ENST00000466532 ISL1P61371 349 aa15.43■□□□□ 0.06
COL9A3-206ENST00000466532 ZNF91Q05481 1191 aa15.43■□□□□ 0.06
COL9A3-206ENST00000466532 ARSJQ5FYB0 599 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-206ENST00000466532 FAM58AQ8N1B3 248 aa15.43■□□□□ 0.06
COL9A3-206ENST00000466532 DNAAF1Q8NEP3 725 aa15.43■□□□□ 0.06
COL9A3-206ENST00000466532 RFKQ969G6 155 aa15.43■□□□□ 0.06
COL9A3-206ENST00000466532 ADAT3Q96EY9 351 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-206ENST00000466532 SEBOXQ9HB31 216 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-206ENST00000466532 SESN1Q9Y6P5 492 aa15.43■□□□□ 0.06
COL9A3-206ENST00000466532 IGHV2-26A0A0B4J1V2 119 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 F2RL2O00254 374 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 DYNC1I1O14576 645 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 PEX14O75381 377 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 BCL3P20749 454 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 RASSF2P50749 326 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 DYNLT3P51808 116 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 SNU13P55769 128 aaKnown RBP15.42■□□□□ 0.06
COL9A3-206ENST00000466532 SLC34A1Q06495 639 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 KPRPQ5T749 579 aaPredicted RBP15.42■□□□□ 0.06
COL9A3-206ENST00000466532 MINOS1Q5TGZ0 78 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 NDNFQ8TB73 568 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 OR5M11Q96RB7 305 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 OAZ3Q9UMX2 235 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 MINOS1-NBL1R4GNA1 71 aa15.42■□□□□ 0.06
COL9A3-206ENST00000466532 IGKV1-9A0A0C4DH69 117 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 TRBV2A0A0J9YWF9 115 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 PSPNO60542 156 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 ENTPD6O75354 484 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 CALCBP10092 127 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 PRKACAP17612 351 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 ATF1P18846 271 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 AZGP1P25311 298 aaKnown RBP15.41■□□□□ 0.06
COL9A3-206ENST00000466532 MTCP1P56278 107 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 CDC42P60953 191 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 EMX1Q04741 257 aaPredicted RBP15.41■□□□□ 0.06
COL9A3-206ENST00000466532 ZNF146Q15072 292 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 TMEM244Q5VVB8 128 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 TRAPPC6BQ86SZ2 158 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 OR4S1Q8NGB4 309 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 RNF166Q96A37 237 aaPredicted RBP15.41■□□□□ 0.06
COL9A3-206ENST00000466532 CENPNQ96H22 339 aaPredicted RBP15.41■□□□□ 0.06
COL9A3-206ENST00000466532 OSBPL10Q9BXB5 764 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 CLEC7AQ9BXN2 247 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 TMEM133Q9H2Q1 129 aa15.41■□□□□ 0.06
COL9A3-206ENST00000466532 SAC3D1A6NKF1 404 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 MGST3O14880 152 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 PRB2P02812 416 aaPredicted RBP15.4■□□□□ 0.06
COL9A3-206ENST00000466532 ZNF20P17024 532 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 PRKACBP22694 351 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 SPIN3Q5JUX0 258 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 Q6ZS46 218 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 ZBTB49Q6ZSB9 765 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 LHFPL2Q6ZUX7 228 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 UTS2BQ765I0 119 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 NDUFA11Q86Y39 141 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 OR2G2Q8NGZ5 317 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 FGGYQ96C11 551 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 CITED2Q99967 270 aaPredicted RBP15.4■□□□□ 0.06
COL9A3-206ENST00000466532 WNT10AQ9GZT5 417 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 MMP28Q9H239 520 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 GLS2Q9UI32 602 aa15.4■□□□□ 0.06
COL9A3-206ENST00000466532 SIRPB1O00241 398 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 MMP23AO75900 390 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 ERP29P30040 261 aaKnown RBP15.39■□□□□ 0.05
COL9A3-206ENST00000466532 VDAC2P45880 294 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-206ENST00000466532 OR3A1P47881 315 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 P2RX3P56373 397 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 BLCAPP62952 87 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 TMEM95Q3KNT9 176 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 OR4F17Q8NGA8 305 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 WIPF2Q8TF74 440 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-206ENST00000466532 RFT1Q96AA3 541 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 R3HDM4Q96D70 268 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 OPALINQ96PE5 141 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 OR4F4Q96R69 305 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 HMG20AQ9NP66 347 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 IMPAD1Q9NX62 359 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 FAM53CQ9NYF3 392 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 FRRS1LQ9P0K9 344 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 GSTK1Q9Y2Q3 226 aa15.39■□□□□ 0.05
COL9A3-206ENST00000466532 UBE2J1Q9Y385 318 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-206ENST00000466532 DAPL1A0PJW8 107 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 XPNPEP2O43895 674 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 ATP5HO75947 161 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms