RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CRIP3Q6Q6R5 217 aa14.1□□□□□ -0.15
VPS52-215ENST00000464425 MKXQ8IYA7 352 aa14.1□□□□□ -0.15
VPS52-215ENST00000464425 OR52N4Q8NGI2 321 aa14.1□□□□□ -0.15
VPS52-215ENST00000464425 SLAMF9Q96A28 289 aa14.1□□□□□ -0.15
VPS52-215ENST00000464425 MED30Q96HR3 178 aa14.1□□□□□ -0.15
VPS52-215ENST00000464425 NRIP2Q9BQI9 281 aa14.1□□□□□ -0.15
VPS52-215ENST00000464425 DNTTIP1Q9H147 329 aa14.1□□□□□ -0.15
VPS52-215ENST00000464425 SLITRK2Q9H156 845 aa14.1□□□□□ -0.15
VPS52-215ENST00000464425 F8VVB4 439 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 F8VWA3 439 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 ECDO95905 644 aaPredicted RBP14.09□□□□□ -0.15
VPS52-215ENST00000464425 TFAP2AP05549 437 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 CD37P11049 281 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 POU3F4P49335 361 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 CEBPDP49716 269 aaPredicted RBP14.09□□□□□ -0.15
VPS52-215ENST00000464425 SCGB2A2Q13296 93 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 DDI2Q5TDH0 399 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 GDPGP1Q6ZNW5 385 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 SLC25A26Q70HW3 274 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 SAXO1Q8IYX7 474 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 CD177Q8N6Q3 437 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 NKAIN3Q8N8D7 197 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 PNLDC1Q8NA58 520 aaKnown RBP14.09□□□□□ -0.15
VPS52-215ENST00000464425 ZSCAN4Q8NAM6 433 aaPredicted RBP14.09□□□□□ -0.15
VPS52-215ENST00000464425 ZNRF1Q8ND25 227 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 OR13F1Q8NGS4 319 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 H1FXQ92522 213 aaKnown RBP14.09□□□□□ -0.15
VPS52-215ENST00000464425 RFT1Q96AA3 541 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 YIPF6Q96EC8 236 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 SPACA5Q96QH8 159 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 MTCH1Q9NZJ7 389 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 SLC25A10Q9UBX3 287 aaPredicted RBP14.09□□□□□ -0.15
VPS52-215ENST00000464425 RPUSD1Q9UJJ7 312 aaKnown RBP14.09□□□□□ -0.15
VPS52-215ENST00000464425 ZNF222Q9UK12 451 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 SSR3Q9UNL2 185 aa14.09□□□□□ -0.15
VPS52-215ENST00000464425 FBN1P35555 2871 aaKnown RBP14.08□□□□□ -0.16
VPS52-215ENST00000464425 TRAV1-2A0A0B4J238 106 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 SIGLEC5O15389 551 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 TCF21O43680 179 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 CYB5AP00167 134 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 MAS1P04201 325 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 LIPFP07098 398 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 IGHV4-38-2P0DP08 117 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 NDUFB7P17568 137 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 PRDX2P32119 198 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 ZNF93P35789 620 aaPredicted RBP14.08□□□□□ -0.16
VPS52-215ENST00000464425 ALDH3B2P48448 385 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 ZP1P60852 638 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 ERVK11-1P61568 191 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 ARF6P62330 175 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 TIMM50Q3ZCQ8 353 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 RNF144BQ7Z419 303 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 LRRTM1Q86UE6 522 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 LYPD6Q86Y78 171 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 TMEM185AQ8NFB2 350 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 UPRTQ96BW1 309 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 FOXRED1Q96CU9 486 aaPredicted RBP14.08□□□□□ -0.16
VPS52-215ENST00000464425 CEP19Q96LK0 163 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 SLC6A7Q99884 636 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 PCGF1Q9BSM1 259 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 RHOFQ9HBH0 211 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 HES4Q9HCC6 221 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 TXNL4BQ9NX01 149 aaKnown RBP14.08□□□□□ -0.16
VPS52-215ENST00000464425 OR14J1Q9UGF5 321 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 NUP50Q9UKX7 468 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 GSTK1Q9Y2Q3 226 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 MAB21L2Q9Y586 359 aa14.08□□□□□ -0.16
VPS52-215ENST00000464425 SPRY1O43609 319 aaPredicted RBP14.07□□□□□ -0.16
VPS52-215ENST00000464425 SFTPBP07988 381 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 GADD45AP24522 165 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 CALRP27797 417 aaKnown RBP14.07□□□□□ -0.16
VPS52-215ENST00000464425 CAPZA1P52907 286 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 ASCL4Q6XD76 172 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 SATL1Q86VE3 508 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 Q8IYB0 196 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 BCL6BQ8N143 479 aaPredicted RBP14.07□□□□□ -0.16
VPS52-215ENST00000464425 BPIFB2Q8N4F0 458 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 PXT1Q8NFP0 134 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 SDSLQ96GA7 329 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 GPER1Q99527 375 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 UQCC2Q9BRT2 126 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 OR51E2Q9H255 320 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 CNTD2Q9H8S5 307 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 ELL3Q9HB65 397 aaPredicted RBP14.07□□□□□ -0.16
VPS52-215ENST00000464425 ZNF69Q9UC07 566 aa14.07□□□□□ -0.16
VPS52-215ENST00000464425 RNF212BA8MTL3 300 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 GPR37O15354 613 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 TOX4O94842 621 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 PPIAL4GP0DN37 164 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 CALCBP10092 127 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 BCL3P20749 454 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 FPR2P25090 351 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 PTGFRP43088 359 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 NPBWR2P48146 333 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 PSMD7P51665 324 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 C11orf91Q3C1V1 193 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 METTL11BQ5VVY1 283 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 C22orf42Q6IC83 251 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 LY6G5BQ8NDX9 201 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 OR5D18Q8NGL1 313 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms