RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 ZNF230Q9UIE0 474 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-216ENST00000464275 ST3GAL6Q9Y274 331 aa18.68■□□□□ 0.58
PDLIM2-216ENST00000464275 MPC1Q9Y5U8 109 aa18.68■□□□□ 0.58
PDLIM2-216ENST00000464275 INTS1Q8N201 2190 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-216ENST00000464275 GVINP1Q7Z2Y8 2422 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 CEP250Q9BV73 2442 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 A0A0B4J2A0 478 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 ANKRD30BLA7E2S9 258 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 HOXD4P09016 255 aaPredicted RBP18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 COX5AP20674 150 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 PIGYQ3MUY2 71 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 C17orf107Q6ZR85 190 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 SLC38A6Q8IZM9 456 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 RBMXL3Q8N7X1 1067 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 OR5AP2Q8NGF4 316 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 PPP1R1CQ8WVI7 109 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 FAAP24Q9BTP7 215 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 SHARPINQ9H0F6 387 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 CDH20Q9HBT6 801 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 SHPKQ9UHJ6 478 aa18.67■□□□□ 0.58
PDLIM2-216ENST00000464275 GEMIN2O14893 280 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 SCO1O75880 301 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 RLN2P04090 185 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 GPM6AP51674 278 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 RBM11P57052 281 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 ZNF701Q9NV72 531 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 DKK4Q9UBT3 224 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 EDARQ9UNE0 448 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 DBX1A6NMT0 343 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 ZNF732B4DXR9 585 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 CRYABP02511 175 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 CHRFAM7AQ494W8 412 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 TMEM185AQ8NFB2 350 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 OR10AD1Q8NGE0 317 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 MARCH1Q8TCQ1 289 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 OR51B6Q9H340 312 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 AK3Q9UIJ7 227 aa18.66■□□□□ 0.58
PDLIM2-216ENST00000464275 CELA3BP08861 270 aa18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 DTYMKP23919 212 aa18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 HAAOP46952 286 aa18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 IDH3GP51553 393 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 FOXF2Q12947 444 aa18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 FOXC1Q12948 553 aa18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 TMEM128Q5BJH2 165 aa18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 ELP2Q6IA86 826 aa18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 TMEM200AQ86VY9 491 aa18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 INO80EQ8NBZ0 244 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 MAFIPQ8WZ33 124 aa18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 OR5P3Q8WZ94 311 aa18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 VRK1Q99986 396 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 CMSS1Q9BQ75 279 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 NMES1Q9C002 83 aa18.65■□□□□ 0.58
PDLIM2-216ENST00000464275 A0A1W2PR80 420 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A10PA6NDY2 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 MBD3L4A6NDZ8 208 aaPredicted RBP18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A18PA6NE21 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 MBD3L3A6NE82 208 aaPredicted RBP18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A16PA6NEW6 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A20PA6NIJ5 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 MBD3L5A6NJ08 208 aaPredicted RBP18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A8PA6NJQ4 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A7PA6NKC0 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A22PA8MWA6 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A12PA8MX19 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A5PA8MXJ8 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A23PA8MXZ1 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A15PP0C7V4 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A13PP0C7W8 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A14PP0C7W9 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FAM90A24PP0C7X0 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 HOXC12P31275 282 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 PMELP40967 661 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FBXW12Q6X9E4 464 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 MYPOPQ86VE0 399 aaPredicted RBP18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 LHFPL1Q86WI0 220 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 MKXQ8IYA7 352 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 MBD3L2Q8NHZ7 208 aaPredicted RBP18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 SULT4A1Q9BR01 284 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 FN3KRPQ9HA64 309 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 EHFQ9NZC4 300 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 ZNF629Q9UEG4 869 aaPredicted RBP18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 GPR132Q9UNW8 380 aa18.64■□□□□ 0.58
PDLIM2-216ENST00000464275 RNF222A6NCQ9 220 aa18.64■□□□□ 0.57
PDLIM2-216ENST00000464275 OR5B21A6NL26 309 aa18.64■□□□□ 0.57
PDLIM2-216ENST00000464275 POM121CA8CG34 1229 aa18.64■□□□□ 0.57
PDLIM2-216ENST00000464275 RRP8O43159 456 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-216ENST00000464275 PDCD6O75340 191 aa18.64■□□□□ 0.57
PDLIM2-216ENST00000464275 CBR1P16152 277 aa18.64■□□□□ 0.57
PDLIM2-216ENST00000464275 TUSC1Q2TAM9 212 aa18.64■□□□□ 0.57
PDLIM2-216ENST00000464275 BHLHE23Q8NDY6 225 aa18.64■□□□□ 0.57
PDLIM2-216ENST00000464275 HDHD3Q9BSH5 251 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-216ENST00000464275 PROCRQ9UNN8 238 aa18.64■□□□□ 0.57
PDLIM2-216ENST00000464275 LHX6Q9UPM6 363 aa18.64■□□□□ 0.57
PDLIM2-216ENST00000464275 TRBV6-7A0A0A0MS04 114 aa18.63■□□□□ 0.57
PDLIM2-216ENST00000464275 PRSS44E7EML9 344 aa18.63■□□□□ 0.57
PDLIM2-216ENST00000464275 MKRN2OSH3BPM6 223 aa18.63■□□□□ 0.57
PDLIM2-216ENST00000464275 SMPD2O60906 423 aa18.63■□□□□ 0.57
PDLIM2-216ENST00000464275 VAMP1P23763 118 aa18.63■□□□□ 0.57
PDLIM2-216ENST00000464275 IL32P24001 234 aa18.63■□□□□ 0.57
PDLIM2-216ENST00000464275 FPR2P25090 351 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms