RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 MTCP1P56278 107 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 ZNF91Q05481 1191 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 FAM189A2Q15884 450 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 SPIN3Q5JUX0 258 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 MINOS1Q5TGZ0 78 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 LHFPL2Q6ZUX7 228 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 TCF23Q7RTU1 214 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 RDH10Q8IZV5 341 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 FAM58AQ8N1B3 248 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 SPSB1Q96BD6 273 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 ADAT3Q96EY9 351 aaPredicted RBP11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 MBOAT4Q96T53 435 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 GLS2Q9UI32 602 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 FOXJ3Q9UPW0 622 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 ORC6Q9Y5N6 252 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 SESN1Q9Y6P5 492 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 MINOS1-NBL1R4GNA1 71 aa11.6□□□□□ -0.55
SNRNP40-203ENST00000463988 A0A0G2JK05 382 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 DAPL1A0PJW8 107 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 SNTNA6NMZ2 147 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 E9PQ18 207 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 MGST3O14880 152 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 SLC16A6O15403 523 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 ENTPD6O75354 484 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 IGHA1P01876 353 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 MT-ND2P03891 347 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 OPN1MWP04001 364 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 OPN1MW2P0DN77 364 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 OPN1MW3P0DN78 364 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 ZNF20P17024 532 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 ATF1P18846 271 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 GABRR1P24046 479 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 AZGP1P25311 298 aaKnown RBP11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 NPBWR2P48146 333 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 OR12D2P58182 307 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 PDZK1IP1Q13113 114 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 GRK1Q15835 563 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 SSX2Q16385 188 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 LDLRAD2Q5SZI1 272 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 CCBE1Q6UXH8 406 aaPredicted RBP11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 ZBTB49Q6ZSB9 765 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 OR52N4Q8NGI2 321 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 FGGYQ96C11 551 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 RNFT2Q96EX2 444 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 MYCBPQ99417 103 aaPredicted RBP11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 ZNF702PQ9H963 129 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 RHOFQ9HBH0 211 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 RBFOX1Q9NWB1 397 aaKnown RBP11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 FRRS1LQ9P0K9 344 aa11.59□□□□□ -0.55
SNRNP40-203ENST00000463988 PSPNO60542 156 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 INMTO95050 263 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 RPSAP08865 295 aaKnown RBP11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 VSIG10L2P0DP72 767 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 BCL3P20749 454 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 POU3F4P49335 361 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 RAB13P51153 203 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 ACTA2P62736 377 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 ACTG2P63267 376 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 DYNC1I2Q13409 638 aaKnown RBP11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 EDDM3AQ14507 147 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 ACBD7Q8N6N7 88 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 ZNF676Q8N7Q3 588 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 OPALINQ96PE5 141 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 NKX3-1Q99801 234 aaPredicted RBP11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 CLEC7AQ9BXN2 247 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 PRSS22Q9GZN4 317 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 TMEM133Q9H2Q1 129 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 HMG20AQ9NP66 347 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 SERTAD4Q9NUC0 356 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 IL36RNQ9UBH0 155 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 HHLA2Q9UM44 414 aa11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 UBE2J1Q9Y385 318 aaPredicted RBP11.58□□□□□ -0.56
SNRNP40-203ENST00000463988 IGHV2-26A0A0B4J1V2 119 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 MEX3AA1L020 520 aaKnown RBP11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 FUOMA2VDF0 154 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 H3BUI4 141 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 SH2D1BO14796 132 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 HTR1AP08908 422 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 PRKACAP17612 351 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 LMO1P25800 156 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 OR3A1P47881 315 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 ALDH3A2P51648 485 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 P2RX3P56373 397 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 NANOS3P60323 173 aaKnown RBP11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 EMX1Q04741 257 aaPredicted RBP11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 PLA1AQ53H76 456 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 SAXO1Q8IYX7 474 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 OR4S1Q8NGB4 309 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 PYDC1Q8WXC3 89 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 MRPL48Q96GC5 212 aaKnown RBP11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 CHST6Q9GZX3 395 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 NEK6Q9HC98 313 aa11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 EXOGQ9Y2C4 368 aaKnown RBP11.57□□□□□ -0.56
SNRNP40-203ENST00000463988 OR4C45A6NMZ5 311 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 FAM90A22PA8MWA6 464 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 F2RL2O00254 374 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 EI24O14681 340 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 KDM4BO94953 1096 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 ALX3O95076 343 aa11.56□□□□□ -0.56
SNRNP40-203ENST00000463988 ALDOBP05062 364 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms