RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 FAM45AQ8TCE6 357 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 DNAJB3Q8WWF6 145 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 NELFBQ8WX92 580 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 C22orf15Q8WYQ4 148 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 FXYD5Q96DB9 178 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 MRPL48Q96GC5 212 aaKnown RBP2.52□□□□□ -2.01
USH2A-203ENST00000463147 NDFIP1Q9BT67 221 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 ZNF426Q9BUY5 554 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 TAPBPLQ9BX59 468 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 LHX5Q9H2C1 402 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 ASB8Q9H765 288 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 PSMD13Q9UNM6 376 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 TMEM14AQ9Y6G1 99 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 DYSFO75923 2080 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 CEP164Q9UPV0 1460 aa2.52□□□□□ -2.01
USH2A-203ENST00000463147 PTPRTO14522 1441 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 WDR97A6NE52 1622 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 LOC389332A0A1B0GUA5 103 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 TMEM72A0PK05 275 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 C9J4A7 227 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 C8orf87E5RJ46 101 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 FABP7O15540 132 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 PLIN3O60664 434 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 CTDNEP1O95476 244 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 CD74P04233 296 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 OCMP0CE72 109 aaPredicted RBP2.51□□□□□ -2.01
USH2A-203ENST00000463147 PRSS3P35030 304 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 TTPAP49638 278 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 MEF2CQ06413 473 aaPredicted RBP2.51□□□□□ -2.01
USH2A-203ENST00000463147 PRDX1Q06830 199 aaKnown RBP2.51□□□□□ -2.01
USH2A-203ENST00000463147 ADIGQ0VDE8 80 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 SP6Q3SY56 376 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 ZNF404Q494X3 552 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 KCTD16Q68DU8 428 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 MED27Q6P2C8 311 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 PLEKHG7Q6ZR37 379 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 FAM183BPQ6ZVS7 135 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 PLCZ1Q86YW0 608 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 TMEM156Q8N614 296 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 OR5AK3PQ8NH89 298 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 ZNF420Q8TAQ5 688 aaPredicted RBP2.51□□□□□ -2.01
USH2A-203ENST00000463147 FAM57AQ8TBR7 257 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 C17orf50Q8WW18 174 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 MRAP2Q96G30 205 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 MBOAT7Q96N66 472 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 OR2M4Q96R27 311 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 RNF5Q99942 180 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 PAIP2Q9BPZ3 127 aaKnown RBP2.51□□□□□ -2.01
USH2A-203ENST00000463147 PARD6GQ9BYG4 376 aaPredicted RBP2.51□□□□□ -2.01
USH2A-203ENST00000463147 FBXL15Q9H469 300 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 DHX35Q9H5Z1 703 aaKnown RBP2.51□□□□□ -2.01
USH2A-203ENST00000463147 METTL8Q9H825 291 aaKnown RBP2.51□□□□□ -2.01
USH2A-203ENST00000463147 EXOSC4Q9NPD3 245 aaKnown RBP2.51□□□□□ -2.01
USH2A-203ENST00000463147 TAS2R5Q9NYW4 299 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 DNAJC27Q9NZQ0 273 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 YTHDF2Q9Y5A9 579 aaKnown RBP2.51□□□□□ -2.01
USH2A-203ENST00000463147 TUBGCP6Q96RT7 1819 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 PRDM2Q13029 1718 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 NPHP4O75161 1426 aaPredicted RBP2.51□□□□□ -2.01
USH2A-203ENST00000463147 CLIP1P30622 1438 aa2.51□□□□□ -2.01
USH2A-203ENST00000463147 POLR3AO14802 1390 aaPredicted RBP2.5□□□□□ -2.01
USH2A-203ENST00000463147 DNMT1P26358 1616 aaKnown RBP2.5□□□□□ -2.01
USH2A-203ENST00000463147 MYO3BQ8WXR4 1341 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 RB1CC1Q8TDY2 1594 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 GOLGA6L10A6NI86 522 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 H3BP45 60 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 LGALS9O00182 355 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 TCAPO15273 167 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 PSIP1O75475 530 aaKnown RBP2.5□□□□□ -2.01
USH2A-203ENST00000463147 RAB36O95755 333 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 CCNE2O96020 404 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 ORM1P02763 201 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 NELFEP18615 380 aaKnown RBP2.5□□□□□ -2.01
USH2A-203ENST00000463147 HLA-DMAP28067 261 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 STC1P52823 247 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 CDC20Q12834 499 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 DMC1Q14565 340 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 UBE2SQ16763 222 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 LINC00483Q53H64 154 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 YIF1BQ5BJH7 314 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 CLEC12AQ5QGZ9 265 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 XKRXQ6PP77 449 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 UGT2A3Q6UWM9 527 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 CLEC18BQ6UXF7 455 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 ZNF695Q8IW36 515 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 ZNF101Q8IZC7 436 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 NECAP1Q8NC96 275 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 UBALD1Q8TB05 177 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 DDIT4LQ96D03 193 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 OR10C1Q96KK4 312 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 DERL3Q96Q80 235 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 LINC01587Q99440 93 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 GPR22Q99680 433 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 SUCNR1Q9BXA5 334 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 MS4A8Q9BY19 250 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 ZNF436Q9C0F3 470 aaPredicted RBP2.5□□□□□ -2.01
USH2A-203ENST00000463147 ING2Q9H160 280 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 PARP11Q9NR21 331 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 DIABLOQ9NR28 239 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms