RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 TPRX1Q8N7U7 411 aa8.9□□□□□ -0.98
PTPN7-204ENST00000462815 LINC00482Q8N8I6 264 aa8.9□□□□□ -0.98
PTPN7-204ENST00000462815 ASCC1Q8N9N2 400 aaKnown RBP8.9□□□□□ -0.98
PTPN7-204ENST00000462815 NRG4Q8WWG1 115 aa8.9□□□□□ -0.98
PTPN7-204ENST00000462815 MYDGFQ969H8 173 aa8.9□□□□□ -0.98
PTPN7-204ENST00000462815 RNF166Q96A37 237 aaPredicted RBP8.9□□□□□ -0.98
PTPN7-204ENST00000462815 NRBF2Q96F24 287 aa8.9□□□□□ -0.98
PTPN7-204ENST00000462815 RCC1LQ96I51 464 aaKnown RBP8.9□□□□□ -0.98
PTPN7-204ENST00000462815 APOL4Q9BPW4 351 aa8.9□□□□□ -0.98
PTPN7-204ENST00000462815 TMEM133Q9H2Q1 129 aa8.9□□□□□ -0.98
PTPN7-204ENST00000462815 ADGRL4Q9HBW9 690 aa8.9□□□□□ -0.98
PTPN7-204ENST00000462815 OR52A1Q9UKL2 312 aa8.9□□□□□ -0.98
PTPN7-204ENST00000462815 LINC00312Q9Y6C7 94 aa8.9□□□□□ -0.98
PTPN7-204ENST00000462815 EPPK1P58107 5090 aaKnown RBP8.89□□□□□ -0.99
PTPN7-204ENST00000462815 LOC110117498-PIK3R3F6TDL0 507 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 GNGT2O14610 69 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 PRKYO43930 277 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 PEX14O75381 377 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 IGLV1-47P01700 117 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 EDDM3BP56851 147 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 CXCR4P61073 352 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 SLC35A2P78381 396 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 ZNF91Q05481 1191 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 DYNC1I2Q13409 638 aaKnown RBP8.89□□□□□ -0.99
PTPN7-204ENST00000462815 ZNF322Q6U7Q0 402 aaPredicted RBP8.89□□□□□ -0.99
PTPN7-204ENST00000462815 C16orf82Q7Z2V1 217 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 SLAMF9Q96A28 289 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 SNX22Q96L94 193 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 CEP19Q96LK0 163 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 CNN2Q99439 309 aaKnown RBP8.89□□□□□ -0.99
PTPN7-204ENST00000462815 LIN7BQ9HAP6 207 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 TVP23BQ9NYZ1 205 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 HHLA2Q9UM44 414 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 TSSC4Q9Y5U2 329 aaPredicted RBP8.89□□□□□ -0.99
PTPN7-204ENST00000462815 TMEM14AQ9Y6G1 99 aa8.89□□□□□ -0.99
PTPN7-204ENST00000462815 M0R129 80 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 ALDOBP05062 364 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 ANXA8P13928 327 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 CD24P25063 80 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 GDNFP39905 211 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 OR3A1P47881 315 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 CRISP1P54107 249 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 OR12D2P58182 307 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 SNAPC1Q16533 368 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 ARSJQ5FYB0 599 aaPredicted RBP8.88□□□□□ -0.99
PTPN7-204ENST00000462815 UTF1Q5T230 341 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 BCL2L15Q5TBC7 163 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 OGFRL1Q5TC84 451 aaPredicted RBP8.88□□□□□ -0.99
PTPN7-204ENST00000462815 LPCAT4Q643R3 524 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 FAHD1Q6P587 224 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 GDPD3Q7L5L3 318 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 ZNF676Q8N7Q3 588 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 TRMT10AQ8TBZ6 339 aaKnown RBP8.88□□□□□ -0.99
PTPN7-204ENST00000462815 SLC29A1Q99808 456 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 CLEC7AQ9BXN2 247 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 CHST6Q9GZX3 395 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 IKZF2Q9UKS7 526 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 OAZ3Q9UMX2 235 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 STAB2Q8WWQ8 2551 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 LYSTQ99698 3801 aa8.88□□□□□ -0.99
PTPN7-204ENST00000462815 IGKV1-9A0A0C4DH69 117 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 FAM230AA0A1W2PPH8 454 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 TCRBV4S1A1TA0A5B7 111 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 hADV38S2A0JD32 116 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 SH2D7A6NKC9 451 aaPredicted RBP8.87□□□□□ -0.99
PTPN7-204ENST00000462815 SAC3D1A6NKF1 404 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 G3V2T6 193 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 LY6LH3BQJ8 138 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 ENTPD6O75354 484 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 HAND1O96004 215 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 LPLP06858 475 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 PF4V1P10720 104 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 CD34P28906 385 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 EPHA2P29317 976 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 ERP29P30040 261 aaKnown RBP8.87□□□□□ -0.99
PTPN7-204ENST00000462815 HOXD3P31249 432 aaPredicted RBP8.87□□□□□ -0.99
PTPN7-204ENST00000462815 NPBWR2P48146 333 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 DAPP51397 102 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 ESRRGP62508 458 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 BDH1Q02338 343 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 EDDM3AQ14507 147 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 ZNF146Q15072 292 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 PTGES3Q15185 160 aaKnown RBP8.87□□□□□ -0.99
PTPN7-204ENST00000462815 SLC25A26Q70HW3 274 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 MEPCEQ7L2J0 689 aaKnown RBP8.87□□□□□ -0.99
PTPN7-204ENST00000462815 CATSPERDQ86XM0 798 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 SLC35F2Q8IXU6 374 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 NDNFQ8TB73 568 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 RBM14Q96PK6 669 aaKnown RBP8.87□□□□□ -0.99
PTPN7-204ENST00000462815 CIB1Q99828 191 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 B9D2Q9BPU9 175 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 CHST5Q9GZS9 411 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 GABARAPL1Q9H0R8 117 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 RBFOX1Q9NWB1 397 aaKnown RBP8.87□□□□□ -0.99
PTPN7-204ENST00000462815 CLN6Q9NWW5 311 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 SNX5Q9Y5X3 404 aa8.87□□□□□ -0.99
PTPN7-204ENST00000462815 TRBV2A0A0J9YWF9 115 aa8.86□□□□□ -0.99
PTPN7-204ENST00000462815 OR2F2O95006 317 aa8.86□□□□□ -0.99
PTPN7-204ENST00000462815 DUS4LO95620 317 aaKnown RBP8.86□□□□□ -0.99
PTPN7-204ENST00000462815 PF4P02776 101 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms