RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 TMEM82A0PJX8 343 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 SERPINE3A8MV23 424 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 NDUFA2O43678 99 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 SIX6O95475 246 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 ZNF35P13682 527 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 PPP3CBP16298 524 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 MPZP25189 248 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 TIMP3P35625 211 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 MRPL49Q13405 166 aaKnown RBP12.43□□□□□ -0.42
HDAC6-213ENST00000462730 ARL6IP1Q15041 203 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 TAF9Q16594 264 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 C2orf68Q2NKX9 166 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 TUSC1Q2TAM9 212 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 EIF2S3LQ2VIR3 472 aaKnown RBP12.43□□□□□ -0.42
HDAC6-213ENST00000462730 SLC25A26Q70HW3 274 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 C6orf201Q7Z4U5 140 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 OSR2Q8N2R0 312 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 ZNF611Q8N823 705 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 ZNF610Q8N9Z0 462 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 C1orf162Q8NEQ5 155 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-213ENST00000462730 OR2AK2Q8NG84 335 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 OR13C8Q8NGS7 320 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 OR51F2Q8NH61 342 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 COQ8AQ8NI60 647 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 FBXW5Q969U6 566 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 CHST6Q9GZX3 395 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 ARL6Q9H0F7 186 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 PLEKHJ1Q9NW61 149 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 SLC2A8Q9NY64 477 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 FXYD6-FXYD2A0A087WZ82 144 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 ANKRD30BLA7E2S9 258 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 POM121CA8CG34 1229 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 A8MXK9 166 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 F5H5P2 479 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 CRHP06850 196 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 AMY2BP19961 511 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 GPM6AP51674 278 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 ZMYND11Q15326 602 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 MICBQ29980 383 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 CEACAM21Q3KPI0 293 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 PIGYQ3MUY2 71 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 GFRALQ6UXV0 394 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 CXorf67Q86X51 503 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-213ENST00000462730 FBXL14Q8N1E6 418 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 MUC20Q8N307 709 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-213ENST00000462730 WDR31Q8NA23 367 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 FXYD6Q9H0Q3 95 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 ASF1BQ9NVP2 202 aa12.43□□□□□ -0.42
HDAC6-213ENST00000462730 ZZEF1O43149 2961 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 ZNF732B4DXR9 585 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 GOSR2O14653 212 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 PRRG2O14669 202 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 TSPAN4O14817 238 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 SMPD2O60906 423 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 AGFG2O95081 481 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 IFNA6P05013 189 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 SFTPBP07988 381 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 UBE2MP61081 183 aaKnown RBP12.42□□□□□ -0.42
HDAC6-213ENST00000462730 ACTBL2Q562R1 376 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 ATPAF1Q5TC12 328 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-213ENST00000462730 OR2T2Q6IF00 324 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 GSG1LQ6UXU4 331 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 TMED4Q7Z7H5 227 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 HOGA1Q86XE5 327 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 ZSCAN4Q8NAM6 433 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-213ENST00000462730 CCDC107Q8WV48 283 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 HIST1H2AAQ96QV6 131 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 ST6GALNAC5Q9BVH7 336 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 PCDHB16Q9NRJ7 776 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 ZNF581Q9P0T4 197 aa12.42□□□□□ -0.42
HDAC6-213ENST00000462730 J3QW42 95 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 LILRA1O75019 489 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 CA11O75493 328 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 CBR1P16152 277 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 PPP1CBP62140 327 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 ZNF273Q14593 569 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 PPA1Q15181 289 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 C4orf46Q504U0 113 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 DCAF12L2Q5VW00 463 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 BATF2Q8N1L9 274 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 MAFIPQ8WZ33 124 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 EMG1Q92979 244 aaKnown RBP12.41□□□□□ -0.42
HDAC6-213ENST00000462730 ZNF230Q9UIE0 474 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-213ENST00000462730 VSIG4Q9Y279 399 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 CACNA1AO00555 2505 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 CHD8Q9HCK8 2581 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 ATP6V1G2-DDX39BF2Z307 99 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 GEMIN2O14893 280 aaKnown RBP12.41□□□□□ -0.42
HDAC6-213ENST00000462730 CHATP28329 748 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 HAAOP46952 286 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 BTN1A1Q13410 526 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 MPPED2Q15777 294 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 SHEQ5VZ18 495 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 DOLPP1Q86YN1 238 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 OR5H2Q8NGV7 314 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 SLAMF9Q96A28 289 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 MRPS24Q96EL2 167 aaKnown RBP12.41□□□□□ -0.42
HDAC6-213ENST00000462730 BOD1Q96IK1 185 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 TINAGQ9UJW2 476 aa12.41□□□□□ -0.42
HDAC6-213ENST00000462730 ST3GAL6Q9Y274 331 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms