RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SLC25A38Q96DW6 304 aa8.98□□□□□ -0.97
RTF1-202ENST00000462276 DIRAS2Q96HU8 199 aa8.98□□□□□ -0.97
RTF1-202ENST00000462276 NEDD4LQ96PU5 975 aa8.98□□□□□ -0.97
RTF1-202ENST00000462276 GSX2Q9BZM3 304 aa8.98□□□□□ -0.97
RTF1-202ENST00000462276 BANF2Q9H503 90 aa8.98□□□□□ -0.97
RTF1-202ENST00000462276 BEX4Q9NWD9 120 aaPredicted RBP8.98□□□□□ -0.97
RTF1-202ENST00000462276 NLKQ9UBE8 527 aa8.98□□□□□ -0.97
RTF1-202ENST00000462276 HSF4Q9ULV5 492 aa8.98□□□□□ -0.97
RTF1-202ENST00000462276 PPIAL4AQ9Y536 164 aa8.98□□□□□ -0.97
RTF1-202ENST00000462276 CENPEQ02224 2701 aa8.98□□□□□ -0.97
RTF1-202ENST00000462276 AKAP6Q13023 2319 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 DCHS2Q6V1P9 2916 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 FABP12A6NFH5 140 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 OOEPA6NGQ2 149 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 OR2AT4A6NND4 320 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 SERPINE3A8MV23 424 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 RAB27BO00194 218 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 NDUFS8O00217 210 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 DEGS1O15121 323 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 CA11O75493 328 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 RP2O75695 350 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 GSTP1P09211 210 aaKnown RBP8.97□□□□□ -0.97
RTF1-202ENST00000462276 ELK1P19419 428 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 DNASE1P24855 282 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 LMO1P25800 156 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 KCNJ3P48549 501 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 MRPS10P82664 201 aaKnown RBP8.97□□□□□ -0.97
RTF1-202ENST00000462276 LSAMPQ13449 338 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 RBM39Q14498 530 aaKnown RBP8.97□□□□□ -0.97
RTF1-202ENST00000462276 SPRNQ5BIV9 151 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 TMEM69Q5SWH9 247 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 OR10K2Q6IF99 312 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 PYHIN1Q6K0P9 492 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 CCDC190Q86UF4 302 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 LAX1Q8IWV1 398 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 LRRC75A-AS1Q8N1F1 130 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 MUC20Q8N307 709 aaPredicted RBP8.97□□□□□ -0.97
RTF1-202ENST00000462276 OR10R2Q8NGX6 335 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 RAB3CQ96E17 227 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 MED30Q96HR3 178 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 NKX3-1Q99801 234 aaPredicted RBP8.97□□□□□ -0.97
RTF1-202ENST00000462276 SOSTQ9BQB4 213 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 MIXL1Q9H2W2 232 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.97□□□□□ -0.97
RTF1-202ENST00000462276 WIPI2Q9Y4P8 454 aa8.97□□□□□ -0.97
RTF1-202ENST00000462276 UTP20O75691 2785 aaKnown RBP8.97□□□□□ -0.97
RTF1-202ENST00000462276 A0A1W2PP11 408 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 RFPL4AA6NLU0 287 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 RFPL4AL1F8VTS6 287 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 F8VVB4 439 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 F8VWA3 439 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.96□□□□□ -0.98
RTF1-202ENST00000462276 GEMIN2O14893 280 aaKnown RBP8.96□□□□□ -0.98
RTF1-202ENST00000462276 PDCD6O75340 191 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 OR7C1O76099 320 aaPredicted RBP8.96□□□□□ -0.98
RTF1-202ENST00000462276 HAND1O96004 215 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 MELTFP08582 738 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 COL8A2P25067 703 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 GIFP27352 417 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 BLVRBP30043 206 aaPredicted RBP8.96□□□□□ -0.98
RTF1-202ENST00000462276 PRDX2P32119 198 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 CDKN1AP38936 164 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 MDH2P40926 338 aaKnown RBP8.96□□□□□ -0.98
RTF1-202ENST00000462276 EFNB2P52799 333 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 ATP5J2P56134 94 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 BTG1P62324 171 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 TAF9Q16594 264 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 PNLIPRP3Q17RR3 467 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 C11orf91Q3C1V1 193 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 TMEM155Q4W5P6 130 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 SHEQ5VZ18 495 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 CNIH2Q6PI25 160 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 Q6ZTK2 550 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 ZNF561Q8N587 486 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 OR5D13Q8NGL4 314 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 SDSLQ96GA7 329 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 ZNF488Q96MN9 340 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 TSC22D3Q99576 134 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 WDR12Q9GZL7 423 aaKnown RBP8.96□□□□□ -0.98
RTF1-202ENST00000462276 FAM234AQ9H0X4 552 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 WDR13Q9H1Z4 485 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 RIMS4Q9H426 269 aaPredicted RBP8.96□□□□□ -0.98
RTF1-202ENST00000462276 PLEKHJ1Q9NW61 149 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 TREM2Q9NZC2 230 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 RCC2Q9P258 522 aaKnown RBP8.96□□□□□ -0.98
RTF1-202ENST00000462276 KAAG1Q9UBP8 84 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 EXTL2Q9UBQ6 330 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 ARFGEF3Q5TH69 2177 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 UNC79Q9P2D8 2635 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 USF3Q68DE3 2245 aa8.96□□□□□ -0.98
RTF1-202ENST00000462276 FOXI3A8MTJ6 420 aaPredicted RBP8.95□□□□□ -0.98
RTF1-202ENST00000462276 MCRIP1C9JLW8 97 aa8.95□□□□□ -0.98
RTF1-202ENST00000462276 H7C1Q1 480 aa8.95□□□□□ -0.98
RTF1-202ENST00000462276 SULT1C2O00338 296 aa8.95□□□□□ -0.98
RTF1-202ENST00000462276 WNT9BO14905 357 aa8.95□□□□□ -0.98
RTF1-202ENST00000462276 CTDSPLO15194 276 aa8.95□□□□□ -0.98
RTF1-202ENST00000462276 CYB5R3P00387 301 aaPredicted RBP8.95□□□□□ -0.98
RTF1-202ENST00000462276 EIF4EP06730 217 aaKnown RBP8.95□□□□□ -0.98
RTF1-202ENST00000462276 PSG2P11465 335 aa8.95□□□□□ -0.98
RTF1-202ENST00000462276 ZNF44P15621 663 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms