RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 KCNK2O95069 426 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 CXorf1O96002 111 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 IGKV1-39P01597 117 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 RLN2P04090 185 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 IGKV1D-39P04432 117 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 CD28P10747 220 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 MLNP12872 115 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 NQO2P16083 231 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 TAC1P20366 129 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 GCLMP48507 274 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 TUFMP49411 452 aaKnown RBP1.68□□□□□ -2.14
HDAC6-212ENST00000461608 XKP51811 444 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 CCL23P55773 120 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 BAXQ07812 192 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 BNIP2Q12982 314 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 ANGPT1Q15389 498 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 OR4D1Q15615 310 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 Q499Y3 187 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 UBE2NLQ5JXB2 153 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 CLEC18BQ6UXF7 455 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 FA2HQ7L5A8 372 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 SSX7Q7RTT5 188 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 FAM19A1Q7Z5A9 133 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 ITPRIPQ8IWB1 547 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 IQCF2Q8IXL9 164 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 LINC00337Q8N6G1 96 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 ZNF680Q8NEM1 530 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 PHF10Q8WUB8 498 aaKnown RBP1.68□□□□□ -2.14
HDAC6-212ENST00000461608 RORBQ92753 470 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 ATP6V1G3Q96LB4 118 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 PPP1R36Q96LQ0 422 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 ACBD6Q9BR61 282 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 SEC22CQ9BRL7 303 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 THTPAQ9BU02 230 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 ASB7Q9H672 318 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 LINC00574Q9H8X3 128 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 TMBIM4Q9HC24 238 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 FAM60AQ9NP50 221 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 CA10Q9NS85 328 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 MAT2BQ9NZL9 334 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 CLEC2DQ9UHP7 191 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 FADS3Q9Y5Q0 445 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 COL27A1Q8IZC6 1860 aaPredicted RBP1.68□□□□□ -2.14
HDAC6-212ENST00000461608 COL4A4P53420 1690 aaPredicted RBP1.67□□□□□ -2.14
HDAC6-212ENST00000461608 IGKV1-6A0A0C4DH72 117 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 C16orf90A8MZG2 172 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 D6RAR5 112 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 CLDN34H7C241 214 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 I3L4J1 428 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 CDIPTO14735 213 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 COX7A2P2O60397 106 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 LDOC1O95751 146 aaPredicted RBP1.67□□□□□ -2.14
HDAC6-212ENST00000461608 NRASP01111 189 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 HRASP01112 189 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 KRASP01116 189 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 IGKV1D-16P01601 117 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 OR5AC1P0C628 307 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 SCGB1C2P0DMR2 95 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 SLC2A1P11166 492 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 PTHLHP12272 177 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 ACOT2P49753 483 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 GDI2P50395 445 aaKnown RBP1.67□□□□□ -2.14
HDAC6-212ENST00000461608 C1QTNF8P60827 252 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 CD164Q04900 197 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 TRAM1Q15629 374 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 TRIP13Q15645 432 aaPredicted RBP1.67□□□□□ -2.14
HDAC6-212ENST00000461608 SSX1Q16384 188 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 GOLGA7BQ2TAP0 167 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 CEACAM21Q3KPI0 293 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 KPRPQ5T749 579 aaPredicted RBP1.67□□□□□ -2.14
HDAC6-212ENST00000461608 TMEM215Q68D42 235 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 LAMTOR1Q6IAA8 161 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 OR2Y1Q8NGV0 311 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 FAM45AQ8TCE6 357 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 SCGB1C1Q8TD33 95 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 CASTOR1Q8WTX7 329 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 CATSPER2Q96P56 530 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 APOL4Q9BPW4 351 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 PRRG3Q9BZD7 231 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 SRRQ9GZT4 340 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 LHX5Q9H2C1 402 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 OR2S2Q9NQN1 319 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 TAS2R1Q9NYW7 299 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 CYB5R1Q9UHQ9 305 aa1.67□□□□□ -2.14
HDAC6-212ENST00000461608 NXT1Q9UKK6 140 aaKnown RBP1.67□□□□□ -2.14
HDAC6-212ENST00000461608 KLF13Q9Y2Y9 288 aaPredicted RBP1.67□□□□□ -2.14
HDAC6-212ENST00000461608 IGKV1D-17A0A075B6S4 117 aa1.66□□□□□ -2.14
HDAC6-212ENST00000461608 ERICH2A1L162 156 aa1.66□□□□□ -2.14
HDAC6-212ENST00000461608 PGPA6NDG6 321 aa1.66□□□□□ -2.14
HDAC6-212ENST00000461608 RBFOX3A6NFN3 312 aa1.66□□□□□ -2.14
HDAC6-212ENST00000461608 LEUTXA8MZ59 168 aa1.66□□□□□ -2.14
HDAC6-212ENST00000461608 GYG2O15488 501 aa1.66□□□□□ -2.14
HDAC6-212ENST00000461608 ENSAO43768 121 aaKnown RBP1.66□□□□□ -2.14
HDAC6-212ENST00000461608 FSTL3O95633 263 aa1.66□□□□□ -2.14
HDAC6-212ENST00000461608 IGKV1-17P01599 117 aa1.66□□□□□ -2.14
HDAC6-212ENST00000461608 IMPA1P29218 277 aa1.66□□□□□ -2.14
HDAC6-212ENST00000461608 LCN1P31025 176 aa1.66□□□□□ -2.14
HDAC6-212ENST00000461608 UGT2B10P36537 528 aa1.66□□□□□ -2.14
HDAC6-212ENST00000461608 LGALS7P47929 136 aa1.66□□□□□ -2.14
HDAC6-212ENST00000461608 RPS11P62280 158 aaKnown RBP eCLIP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms