RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PARP16Q8N5Y8 322 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 OR52N1Q8NH53 320 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 GGHQ92820 318 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 FAM234AQ9H0X4 552 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 BABAM2Q9NXR7 383 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 CNOT2Q9NZN8 540 aaKnown RBP12.63□□□□□ -0.39
VARS-219ENST00000461328 FAM96BQ9Y3D0 163 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 PCDHGB5Q9Y5G0 923 aa12.63□□□□□ -0.39
VARS-219ENST00000461328 A0A0U1RQK1 487 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 TMEM225BP0DP42 221 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 RAB3AP20336 220 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 DUSP1P28562 367 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 NPBWR2P48146 333 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 AQP4P55087 323 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 EDDM3AQ14507 147 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 TMEM86BQ8N661 226 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 Q8N7P7 452 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 ZFP41Q8N8Y5 198 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 OR5D13Q8NGL4 314 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 TBC1D15Q8TC07 691 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 SSMEM1Q8WWF3 244 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 RGP1Q92546 391 aaPredicted RBP12.62□□□□□ -0.39
VARS-219ENST00000461328 TFAP2CQ92754 450 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 TAF15Q92804 592 aaKnown RBP eCLIP12.62□□□□□ -0.39
VARS-219ENST00000461328 SMIM19Q96E16 107 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 GPER1Q99527 375 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 ZNF747Q9BV97 191 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 FAM192AQ9GZU8 254 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 VCX3BQ9H321 246 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 TAS2R4Q9NYW5 299 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 IL36RNQ9UBH0 155 aa12.62□□□□□ -0.39
VARS-219ENST00000461328 PNMA8CA0A1B0GUJ8 204 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 hCG_1809904A0A1W2PP81 198 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 A0A1W2PPE2 198 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 A0A1W2PR64 198 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 A0A1W2PRV1 198 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 FAM181BA6NEQ2 426 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 RNASEK-C17orf49H0YIS7 233 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 K7N7A8 449 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 CRYBA1P05813 215 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 TAS2R43P59537 309 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 PPP3R1P63098 170 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 KISS1Q15726 138 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 SPIN3Q5JUX0 258 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 METAP1DQ6UB28 335 aaPredicted RBP12.61□□□□□ -0.39
VARS-219ENST00000461328 SATL1Q86VE3 508 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 ZSCAN4Q8NAM6 433 aaPredicted RBP12.61□□□□□ -0.39
VARS-219ENST00000461328 TMEM106AQ96A25 262 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 CHIAQ9BZP6 476 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 UNKLQ9H9P5 680 aaKnown RBP12.61□□□□□ -0.39
VARS-219ENST00000461328 EXOSC4Q9NPD3 245 aaKnown RBP12.61□□□□□ -0.39
VARS-219ENST00000461328 PSORS1C1Q9UIG5 152 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 GSTK1Q9Y2Q3 226 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 ZNF281Q9Y2X9 895 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 POMT1Q9Y6A1 747 aa12.61□□□□□ -0.39
VARS-219ENST00000461328 NPFFO15130 113 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 KDM4BO94953 1096 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 PAHP00439 452 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 CCL3L1P16619 93 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 OMGP23515 440 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 GRK1Q15835 563 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 SHISA2Q6UWI4 295 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 C1orf122Q6ZSJ8 110 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 RNF144BQ7Z419 303 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 OR8H2Q8N162 312 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 SGMS2Q8NHU3 365 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 PPP1R35Q8TAP8 253 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 FBLIM1Q8WUP2 373 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 NRG4Q8WWG1 115 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 SNX22Q96L94 193 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 CHST6Q9GZX3 395 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 HMG20AQ9NP66 347 aa12.6□□□□□ -0.39
VARS-219ENST00000461328 SIRT4Q9Y6E7 314 aaPredicted RBP12.6□□□□□ -0.39
VARS-219ENST00000461328 IGKV1-12A0A0C4DH73 117 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 MEX3AA1L020 520 aaKnown RBP12.59□□□□□ -0.39
VARS-219ENST00000461328 MEIOCA2RUB1 952 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 SIRPB1O00241 398 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 SH2D1BO14796 132 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 OGG1O15527 345 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 ZNF737O75373 536 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 ALX3O95076 343 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 LALBAP00709 142 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 IGKV1D-12P01611 117 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 FBP1P09467 338 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 ZNF44P15621 663 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 MDKP21741 143 aaPredicted RBP12.59□□□□□ -0.39
VARS-219ENST00000461328 COX7A1P24310 79 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 ZNF273Q14593 569 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 TMEM200BQ69YZ2 307 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 LAIR2Q6ISS4 152 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 SAXO1Q8IYX7 474 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 PNKDQ8N490 385 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 OR51A2Q8NGJ7 313 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 OR13C5Q8NGS8 318 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 RPS4Y2Q8TD47 263 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 TNFAIP8L1Q8WVP5 186 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 GHSRQ92847 366 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 PLCXD1Q9NUJ7 323 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 CKLFQ9UBR5 152 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms