RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CEACAM19Q7Z692 300 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 LY6G5BQ8NDX9 201 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 OR51T1Q8NGJ9 327 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 LPAR2Q9HBW0 351 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 NOX4Q9NPH5 578 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 NDUFB11Q9NX14 153 aa8.89□□□□□ -0.99
UBR4-208ENST00000459947 IGKV1D-17A0A075B6S4 117 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 TRDV1A0A1B0GX56 115 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 RFPL4AA6NLU0 287 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 RFPL4AL1F8VTS6 287 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 MGST3O14880 152 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 ZNF205O95201 554 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 BPNT1O95861 308 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 NDUFB7P17568 137 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 LIPKQ5VXJ0 399 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 GDPD3Q7L5L3 318 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 SPARTQ8N0X7 666 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 NR1H4Q96RI1 486 aaPredicted RBP8.88□□□□□ -0.99
UBR4-208ENST00000459947 TMPRSS13Q9BYE2 586 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 IFT22Q9H7X7 185 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 PAX2Q02962 417 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 BTN2A1Q7KYR7 527 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 PHC2Q8IXK0 858 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 OR6M1Q8NGM8 313 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 ZNF418Q8TF45 676 aaPredicted RBP8.88□□□□□ -0.99
UBR4-208ENST00000459947 TMED9Q9BVK6 235 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 WDR13Q9H1Z4 485 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 ELL3Q9HB65 397 aaPredicted RBP8.88□□□□□ -0.99
UBR4-208ENST00000459947 hADV38S2A0JD32 116 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 K7N7A8 449 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 SC5DO75845 299 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 BCL3P20749 454 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 EMX1Q04741 257 aaPredicted RBP8.88□□□□□ -0.99
UBR4-208ENST00000459947 OR8H2Q8N162 312 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 JAGN1Q8N5M9 183 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 FAM216BQ8N7L0 139 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 H1FXQ92522 213 aaKnown RBP8.88□□□□□ -0.99
UBR4-208ENST00000459947 DACT3Q96B18 629 aaPredicted RBP8.88□□□□□ -0.99
UBR4-208ENST00000459947 FAM192AQ9GZU8 254 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 ZNF696Q9H7X3 374 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 OR14J1Q9UGF5 321 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 ING4Q9UNL4 249 aa8.88□□□□□ -0.99
UBR4-208ENST00000459947 MRPS28Q9Y2Q9 187 aaKnown RBP8.88□□□□□ -0.99
UBR4-208ENST00000459947 TRAV1-2A0A0B4J238 106 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 A0A1W2PQ09 198 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 PLATP00750 562 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 GTF2F2P13984 249 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 LMO1P25800 156 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 ZFP36P26651 326 aaKnown RBP8.87□□□□□ -0.99
UBR4-208ENST00000459947 PSMB9P28065 219 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 DGUOKQ16854 277 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 GDPGP1Q6ZNW5 385 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 NUP50Q9UKX7 468 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 PHF1O43189 567 aaPredicted RBP8.87□□□□□ -0.99
UBR4-208ENST00000459947 CSN2P05814 226 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 C1orf100Q5SVJ3 147 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 METAP1DQ6UB28 335 aaPredicted RBP8.87□□□□□ -0.99
UBR4-208ENST00000459947 OR2W3Q7Z3T1 314 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 ASCC1Q8N9N2 400 aaKnown RBP8.87□□□□□ -0.99
UBR4-208ENST00000459947 OR52N4Q8NGI2 321 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 SSR3Q9UNL2 185 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.87□□□□□ -0.997e-7■■■■□ 19.8
UBR4-208ENST00000459947 FSHBP01225 129 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 TK1P04183 234 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 MAP2K4P45985 399 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 COL10A1Q03692 680 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 IKZF1Q13422 519 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 RBM39Q14498 530 aaKnown RBP8.87□□□□□ -0.99
UBR4-208ENST00000459947 TMEM30BQ3MIR4 351 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 GPR157Q5UAW9 335 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 OSR2Q8N2R0 312 aa8.87□□□□□ -0.99
UBR4-208ENST00000459947 UNKLQ9H9P5 680 aaKnown RBP8.87□□□□□ -0.99
UBR4-208ENST00000459947 PNMA8CA0A1B0GUJ8 204 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 DEGS1O15121 323 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 SPRY1O43609 319 aaPredicted RBP8.86□□□□□ -0.99
UBR4-208ENST00000459947 CA11O75493 328 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 HTR3BO95264 441 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 ERVFRD-1P60508 538 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 PAX5Q02548 391 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 SYT6Q5T7P8 510 aaPredicted RBP8.86□□□□□ -0.99
UBR4-208ENST00000459947 CRYBG3Q68DQ2 2970 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 C9orf139Q6ZV77 190 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 C19orf18Q8NEA5 215 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 HEXA-AS1Q9H8Q6 139 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 STUB1Q9UNE7 303 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 TOX4O94842 621 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 SRMP19623 302 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 GMFBP60983 142 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 AWAT2Q6E213 333 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 CD200R1LQ6Q8B3 271 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 USP43Q70EL4 1123 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 TPRA1Q86W33 373 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 CD177Q8N6Q3 437 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 OR13C5Q8NGS8 318 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 RFT1Q96AA3 541 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 WDFY2Q96P53 400 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 UBE2J1Q9Y385 318 aaPredicted RBP8.86□□□□□ -0.99
UBR4-208ENST00000459947 MAB21L2Q9Y586 359 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 ITPR3Q14573 2671 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 C22orf46C9J442 243 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms