RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PI3P19957 117 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 KLK2P20151 261 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 OTX2P32243 289 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 GFRA1P56159 465 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 FGF12P61328 243 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 PLP2Q04941 152 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 RNPS1Q15287 305 aaKnown RBP7.67□□□□□ -1.18
HDAC3-202ENST00000459727 TAF9Q16594 264 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 TMEM164Q5U3C3 297 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 ABHD17BQ5VST6 288 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 SLC22A25Q6T423 547 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 MRPL21Q7Z2W9 205 aaKnown RBP7.67□□□□□ -1.18
HDAC3-202ENST00000459727 YRDCQ86U90 279 aaKnown RBP7.67□□□□□ -1.18
HDAC3-202ENST00000459727 FBXL14Q8N1E6 418 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF565Q8N9K5 539 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 OR10AD1Q8NGE0 317 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 OR51F2Q8NH61 342 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 LYPD6BQ8NI32 183 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 NANOS1Q8WY41 292 aaKnown RBP7.67□□□□□ -1.18
HDAC3-202ENST00000459727 TOMM40LQ969M1 308 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 MARS2Q96GW9 593 aaKnown RBP7.67□□□□□ -1.18
HDAC3-202ENST00000459727 C18orf12Q96KH6 178 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 ALKBH3Q96Q83 286 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-202ENST00000459727 HIST1H2AAQ96QV6 131 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 NRIP2Q9BQI9 281 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 FAAP24Q9BTP7 215 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 MS4A7Q9GZW8 240 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-202ENST00000459727 SLC25A31Q9H0C2 315 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF442Q9H7R0 627 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 AKIRIN1Q9H9L7 192 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-202ENST00000459727 UNKLQ9H9P5 680 aaKnown RBP7.67□□□□□ -1.18
HDAC3-202ENST00000459727 GP6Q9HCN6 339 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 OR2S2Q9NQN1 319 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 SLC2A9Q9NRM0 540 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 RCC2Q9P258 522 aaKnown RBP7.67□□□□□ -1.18
HDAC3-202ENST00000459727 FBXL17Q9UF56 701 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 MLXQ9UH92 298 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 LOXL2Q9Y4K0 774 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 SPTBN4Q9H254 2564 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 PQLC2LA1A4F0 135 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 PMS2P1A4D2B8 440 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 OR5B21A6NL26 309 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 ATP6V1G2-DDX39BF2Z307 99 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 RNASEK-C17orf49H0YIS7 233 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 TSPAN15O95858 294 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 ACTL6AO96019 429 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 PLATP00750 562 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 MMP7P09237 267 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-202ENST00000459727 OR5AC1P0C628 307 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 BAXQ07812 192 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 RPL7L1Q6DKI1 246 aaKnown RBP7.66□□□□□ -1.18
HDAC3-202ENST00000459727 BTNL8Q6UX41 500 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 FBXW12Q6X9E4 464 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 MOB1BQ7L9L4 216 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 RNF144BQ7Z419 303 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 ZDHHC23Q8IYP9 409 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 CMTM1Q8IZ96 169 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 PUSL1Q8N0Z8 303 aaKnown RBP7.66□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF611Q8N823 705 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 OR5L1Q8NGL2 311 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 OR10Z1Q8NGY1 313 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 CT55Q8WUE5 264 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 SULT4A1Q9BR01 284 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 GINS3Q9BRX5 216 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 ACKR4Q9NPB9 350 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 SMCO4Q9NRQ5 59 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 P4HTMQ9NXG6 502 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 LSM5Q9Y4Y9 91 aaKnown RBP7.66□□□□□ -1.18
HDAC3-202ENST00000459727 WDR87Q6ZQQ6 2873 aa7.66□□□□□ -1.18
HDAC3-202ENST00000459727 TRBV6-6A0A0A6YYG2 114 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 A0A1B0GW64 132 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 C5orf63A6NC05 138 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 G3V3Y1 287 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 GPR31O00270 319 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 GEMIN2O14893 280 aaKnown RBP7.65□□□□□ -1.18
HDAC3-202ENST00000459727 HSPA12AO43301 675 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 SPRY1O43609 319 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-202ENST00000459727 ANGPTL7O43827 346 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 PPYP01298 95 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 CD5P06127 495 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 WNT2P09544 360 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 DANCRP0C864 163 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 JMJD7P0C870 316 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 SPP1P10451 314 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 UCP2P55851 309 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 TMEM33P57088 247 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 RAB2AP61019 212 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF92Q03936 586 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 OR8G1Q15617 311 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 TSC22D1Q15714 1073 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 GUCA2BQ16661 112 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 MST1LQ2TV78 715 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 CEACAM21Q3KPI0 293 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 WIPI1Q5MNZ9 446 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-202ENST00000459727 RALGAPA1Q6GYQ0 2036 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 TCEAL6Q6IPX3 200 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 ATRAIDQ6UW56 229 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 RTN4RL2Q86UN3 420 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF573Q86YE8 665 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 OR5A2Q8NGI9 324 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms