RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ING3Q9NXR8 418 aa7.25□□□□□ -1.25
CLTCL1-204ENST00000458188 RASL12Q9NYN1 266 aa7.25□□□□□ -1.25
CLTCL1-204ENST00000458188 STEAP1Q9UHE8 339 aa7.25□□□□□ -1.25
CLTCL1-204ENST00000458188 PCDHB10Q9UN67 800 aa7.25□□□□□ -1.25
CLTCL1-204ENST00000458188 ARFGEF3Q5TH69 2177 aa7.25□□□□□ -1.25
CLTCL1-204ENST00000458188 TRAV38-1A0A0B4J264 116 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 TMEM272A0A1B0GTI8 110 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 MEX3AA1L020 520 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 CEACAM18A8MTB9 384 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 H3BMQ9 156 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 H7C1Q1 480 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 IFNL4K9M1U5 179 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 AIPO00170 330 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 NDUFS8O00217 210 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 HSPB6O14558 160 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 TNFRSF13BO14836 293 aaPredicted RBP7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 GEMIN2O14893 280 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 TMPRSS2O15393 492 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 ADAM20O43506 726 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 NOL3O60936 208 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 FCN3O75636 299 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 CSF3P09919 207 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 CD37P11049 281 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 USF1P22415 310 aaPredicted RBP7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 GABRR1P24046 479 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 MDH2P40926 338 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 PSMD7P51665 324 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 COL10A1Q03692 680 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 UNC119Q13432 240 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 TAF9Q16594 264 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 ZNF404Q494X3 552 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 FOXB2Q5VYV0 432 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 PRSS57Q6UWY2 283 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 USP43Q70EL4 1123 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 CDH26Q8IXH8 852 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 SAXO1Q8IYX7 474 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 OSR2Q8N2R0 312 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 BPIFB2Q8N4F0 458 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 ZNRF1Q8ND25 227 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 OR5H6Q8NGV6 325 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 ANGPTL6Q8NI99 470 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 TBC1D15Q8TC07 691 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 RAB2BQ8WUD1 216 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 FAM3DQ96BQ1 224 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 NICN1Q9BSH3 213 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 CHST6Q9GZX3 395 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 LIN7BQ9HAP6 207 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 CTSZQ9UBR2 303 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 OR5V1Q9UGF6 321 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 RSL24D1Q9UHA3 163 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 ST3GAL6Q9Y274 331 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 MAB21L2Q9Y586 359 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 MAP1AP78559 2803 aaPredicted RBP7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 CSPG4Q6UVK1 2322 aa7.24□□□□□ -1.25
CLTCL1-204ENST00000458188 JMJD1CQ15652 2540 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 TMEM82A0PJX8 343 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 FAM157AC9JC47 383 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 DEGS1O15121 323 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 PHF1O43189 567 aaPredicted RBP7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 HAND1O96004 215 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 IL1AP01583 271 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 ACAA1P09110 424 aaPredicted RBP7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 WNT2P09544 360 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 GTF2F2P13984 249 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 ZNF44P15621 663 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 RPS2P15880 293 aaKnown RBP7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 MUC1P15941 1255 aaPredicted RBP7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 SLC25A16P16260 332 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 MGMTP16455 207 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 CAPZA1P52907 286 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 FGF12P61328 243 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 LMO4P61968 165 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 QRFPP83859 136 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 MADCAM1Q13477 382 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 DGUOKQ16854 277 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 SMIM21Q3B7S5 101 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 ATAD3CQ5T2N8 411 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 STUMQ69YW2 141 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 Q6P435 159 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 BIVMQ86UB2 503 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 ASCC1Q8N9N2 400 aaKnown RBP7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 OR51T1Q8NGJ9 327 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 LGALS14Q8TCE9 139 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 SLC25A46Q96AG3 418 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 GAFA1Q96PS6 74 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 DCUN1D5Q9BTE7 237 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 ZNF665Q9H7R5 613 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 COMMD3Q9UBI1 195 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 ZNF222Q9UK12 451 aa7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 ZNF469Q96JG9 3925 aaPredicted RBP7.23□□□□□ -1.25
CLTCL1-204ENST00000458188 A0A096LNT2 108 aa7.22□□□□□ -1.25
CLTCL1-204ENST00000458188 A0A0A6YYD4 124 aa7.22□□□□□ -1.25
CLTCL1-204ENST00000458188 TMEM14DPA8MWL7 114 aa7.22□□□□□ -1.25
CLTCL1-204ENST00000458188 DVL1O14640 695 aa7.22□□□□□ -1.25
CLTCL1-204ENST00000458188 SH2D1BO14796 132 aa7.22□□□□□ -1.25
CLTCL1-204ENST00000458188 SOCS1O15524 211 aa7.22□□□□□ -1.25
CLTCL1-204ENST00000458188 PSPNO60542 156 aa7.22□□□□□ -1.25
CLTCL1-204ENST00000458188 ZNF780AO75290 641 aaPredicted RBP7.22□□□□□ -1.25
CLTCL1-204ENST00000458188 OR7C1O76099 320 aaPredicted RBP7.22□□□□□ -1.25
CLTCL1-204ENST00000458188 BPNT1O95861 308 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms