RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 RNFT1Q5M7Z0 435 aa14.36□□□□□ -0.11
CCDC43-202ENST00000457422 TMEM200AQ86VY9 491 aa14.36□□□□□ -0.11
CCDC43-202ENST00000457422 BVESQ8NE79 360 aa14.36□□□□□ -0.11
CCDC43-202ENST00000457422 RRNAD1Q96FB5 475 aaKnown RBP14.36□□□□□ -0.11
CCDC43-202ENST00000457422 PIK3IP1Q96FE7 263 aa14.36□□□□□ -0.11
CCDC43-202ENST00000457422 LDAHQ9H6V9 325 aa14.36□□□□□ -0.11
CCDC43-202ENST00000457422 ZDHHC11Q9H8X9 412 aa14.36□□□□□ -0.11
CCDC43-202ENST00000457422 GP6Q9HCN6 339 aa14.36□□□□□ -0.11
CCDC43-202ENST00000457422 SPRR3Q9UBC9 169 aa14.36□□□□□ -0.11
CCDC43-202ENST00000457422 FAM221AA4D161 298 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 KRBOX1C9JBD0 128 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 NAAAQ02083 359 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 PLP2Q04941 152 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 SNTB1Q13884 538 aaKnown RBP14.35□□□□□ -0.11
CCDC43-202ENST00000457422 ZDHHC23Q8IYP9 409 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 TMEM178AQ8NBL3 297 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 MARS2Q96GW9 593 aaKnown RBP14.35□□□□□ -0.11
CCDC43-202ENST00000457422 C12orf49Q9H741 205 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 BARX1Q9HBU1 254 aaPredicted RBP14.35□□□□□ -0.11
CCDC43-202ENST00000457422 MEMO1Q9Y316 297 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 TRGV5A0A0B4J1U4 118 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 TEX46H3BTG2 121 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 TPD52L2O43399 206 aaKnown RBP14.35□□□□□ -0.11
CCDC43-202ENST00000457422 NPBWR2P48146 333 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 RBM39Q14498 530 aaKnown RBP14.35□□□□□ -0.11
CCDC43-202ENST00000457422 FAM74A1Q5RGS3 127 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 SLC22A25Q6T423 547 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 LINC00052Q96N35 136 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 AQP10Q96PS8 301 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 DNAJB11Q9UBS4 358 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 STARD10Q9Y365 291 aa14.35□□□□□ -0.11
CCDC43-202ENST00000457422 CELSR3Q9NYQ7 3312 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 IL18BPO95998 194 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 HOXB5P09067 269 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 ZNF728P0DKX0 622 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 FAM209AQ5JX71 171 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 TMPRSS7Q7RTY8 843 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 BHLHE23Q8NDY6 225 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 OR1K1Q8NGR3 316 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 SUN5Q8TC36 379 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 GALNT14Q96FL9 552 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 OR5AC2Q9NZP5 309 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 TMA7Q9Y2S6 64 aaKnown RBP14.34□□□□□ -0.11
CCDC43-202ENST00000457422 CDRT15L2A8MXV6 281 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 GALR2O43603 387 aaPredicted RBP14.34□□□□□ -0.11
CCDC43-202ENST00000457422 OR7C1O76099 320 aaPredicted RBP14.34□□□□□ -0.11
CCDC43-202ENST00000457422 ZNF205O95201 554 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 NGFP01138 241 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 NUP62P37198 522 aaPredicted RBP14.34□□□□□ -0.11
CCDC43-202ENST00000457422 UCP3P55916 312 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 FGF12P61328 243 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 RAB32Q13637 225 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 SRSF7Q16629 238 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCDC43-202ENST00000457422 FBXW9Q5XUX1 488 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 Q6ZPA2 131 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 Q6ZS49 121 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 VASH2Q86V25 355 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 SUMF1Q8NBK3 374 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 SHARPINQ9H0F6 387 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 ZNF552Q9H707 407 aaPredicted RBP14.34□□□□□ -0.11
CCDC43-202ENST00000457422 ZNF442Q9H7R0 627 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 ZNF629Q9UEG4 869 aaPredicted RBP14.34□□□□□ -0.11
CCDC43-202ENST00000457422 ZNF175Q9Y473 711 aa14.34□□□□□ -0.11
CCDC43-202ENST00000457422 SCO1O75880 301 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 TPT1P13693 172 aaKnown RBP14.33□□□□□ -0.12
CCDC43-202ENST00000457422 BCL3P20749 454 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 HAAOP46952 286 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 GPM6AP51674 278 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 PIGPP57054 158 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 HIKESHIQ53FT3 197 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 FAM219AQ8IW50 185 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 DEFB124Q8NES8 71 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 SLC30A7Q8NEW0 376 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 OR5A2Q8NGI9 324 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 BCL2L2Q92843 193 aaPredicted RBP14.33□□□□□ -0.12
CCDC43-202ENST00000457422 SLAMF9Q96A28 289 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 CCDC120Q96HB5 630 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 NAA60Q9H7X0 242 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 PARD6AQ9NPB6 346 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 CYTL1Q9NRR1 136 aa14.33□□□□□ -0.12
CCDC43-202ENST00000457422 SLC22A20A6NK97 555 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 APLNRP35414 380 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 PMP22Q01453 160 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 SRSF6Q13247 344 aaKnown RBP14.32□□□□□ -0.12
CCDC43-202ENST00000457422 CLN3Q13286 438 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 NANOS1Q8WY41 292 aaKnown RBP14.32□□□□□ -0.12
CCDC43-202ENST00000457422 TOMM40LQ969M1 308 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 MOB3AQ96BX8 217 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 RCC2Q9P258 522 aaKnown RBP14.32□□□□□ -0.12
CCDC43-202ENST00000457422 TUBD1Q9UJT1 453 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 KCNIP3Q9Y2W7 256 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 CACNA1HO95180 2353 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 TTC28Q96AY4 2481 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 ZSCAN5BA6NJL1 495 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 CD300LBA8K4G0 201 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 B8ZZF3 427 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 FCGR2CP31995 323 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 TNFSF10P50591 281 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 MPV17LQ2QL34 196 aa14.32□□□□□ -0.12
CCDC43-202ENST00000457422 UNQ6126/PRO20091Q6UXV3 157 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms