RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 SEBOXQ9HB31 216 aaPredicted RBP12.87□□□□□ -0.35
GPC1-206ENST00000455111 AASSQ9UDR5 926 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 IGHV2-26A0A0B4J1V2 119 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 A0A1W2PPH5 198 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 SULT1C4O75897 302 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 TCTEX1D4Q5JR98 221 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 OR51A4Q8NGJ6 313 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 OR13D1Q8NGV5 346 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 EMG1Q92979 244 aaKnown RBP12.86□□□□□ -0.35
GPC1-206ENST00000455111 OSBPL10Q9BXB5 764 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 PRRG3Q9BZD7 231 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 RAB18Q9NP72 206 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 FRRS1LQ9P0K9 344 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 OAZ3Q9UMX2 235 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 AP4S1Q9Y587 144 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 HILPDAQ9Y5L2 63 aa12.86□□□□□ -0.35
GPC1-206ENST00000455111 FBXO24O75426 580 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 CD24P25063 80 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 FASP25445 335 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 SNU13P55769 128 aaKnown RBP12.85□□□□□ -0.35
GPC1-206ENST00000455111 ACTR3P61158 418 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 MEF2CQ06413 473 aaPredicted RBP12.85□□□□□ -0.35
GPC1-206ENST00000455111 ZNF146Q15072 292 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 GRK1Q15835 563 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 GDPD3Q7L5L3 318 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 ZDHHC13Q8IUH4 622 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 OR2G2Q8NGZ5 317 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 RFT1Q96AA3 541 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 RIBC2Q9H4K1 309 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 SLC7A11Q9UPY5 501 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 LINC00312Q9Y6C7 94 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 SESN1Q9Y6P5 492 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 KIAA2026Q5HYC2 2103 aa12.85□□□□□ -0.35
GPC1-206ENST00000455111 TRBV2A0A0J9YWF9 115 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 hCG_1809904A0A1W2PP81 198 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 A0A1W2PPE2 198 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 A0A1W2PR64 198 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 A0A1W2PRV1 198 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 FAM172BPA6NC97 362 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 ATF1P18846 271 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 AZGP1P25311 298 aaKnown RBP12.84□□□□□ -0.35
GPC1-206ENST00000455111 OR12D2P58182 307 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 DYNC1I2Q13409 638 aaKnown RBP12.84□□□□□ -0.35
GPC1-206ENST00000455111 C10orf99Q6UWK7 81 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 FAM58AQ8N1B3 248 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 ZNF676Q8N7Q3 588 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 RPS4Y2Q8TD47 263 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 FOXRED1Q96CU9 486 aaPredicted RBP12.84□□□□□ -0.35
GPC1-206ENST00000455111 BORCS8Q96FH0 119 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 SPACA5Q96QH8 159 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 MBOAT4Q96T53 435 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 TMEM133Q9H2Q1 129 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 PLEKHA1Q9HB21 404 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 GNG8Q9UK08 70 aa12.84□□□□□ -0.35
GPC1-206ENST00000455111 SH2D7A6NKC9 451 aaPredicted RBP12.83□□□□□ -0.36
GPC1-206ENST00000455111 SAC3D1A6NKF1 404 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 SIRPB1O00241 398 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 GATBO75879 557 aaKnown RBP12.83□□□□□ -0.36
GPC1-206ENST00000455111 IGLV1-47P01700 117 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 AMY1AP04745 511 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 AMY2AP04746 511 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 POU3F4P49335 361 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 PRAMEF5Q5TYX0 476 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 Q6P435 159 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 FDX2Q6P4F2 183 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 NDUFA11Q86Y39 141 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 DNAAF1Q8NEP3 725 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 OR8J1Q8NGP2 316 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 FGGYQ96C11 551 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 COQ2Q96H96 371 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 ZNF649Q9BS31 505 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 HMG20AQ9NP66 347 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 AURKAIP1Q9NWT8 199 aaPredicted RBP12.83□□□□□ -0.36
GPC1-206ENST00000455111 KMT2CQ8NEZ4 4911 aaKnown RBP12.83□□□□□ -0.36
GPC1-206ENST00000455111 NOTCH3Q9UM47 2321 aa12.83□□□□□ -0.36
GPC1-206ENST00000455111 hADV38S2A0JD32 116 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 OR2H2O95918 312 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 ISG15P05161 165 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 PRKACAP17612 351 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 GABRR1P24046 479 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 GLIPR1P48060 266 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 RBP2P50120 134 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 P2RX3P56373 397 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 CD83Q01151 205 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 SLC34A1Q06495 639 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 PDZK1IP1Q13113 114 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 MINOS1Q5TGZ0 78 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 UTS2BQ765I0 119 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 PP6455Q8WZ26 134 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 PHF21AQ96BD5 680 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 R3HDM4Q96D70 268 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 PELI1Q96FA3 418 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 CLEC7AQ9BXN2 247 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 PRSS22Q9GZN4 317 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 ZNF286AQ9HBT8 521 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.82□□□□□ -0.36
GPC1-206ENST00000455111 MINOS1-NBL1R4GNA1 71 aa12.82□□□□□ -0.36
GPC1-206ENST00000455111 OR4C45A6NMZ5 311 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 H3BNX3 289 aa12.81□□□□□ -0.36
GPC1-206ENST00000455111 MGST3O14880 152 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms