RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 METTL21EPA6NDL7 271 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 OR2AT4A6NND4 320 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 VWC2LB2RUY7 222 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 RAB27BO00194 218 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 WNT9BO14905 357 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 CRTAPO75718 401 aaPredicted RBP9.42□□□□□ -0.9
TRAF4-206ENST00000454852 CLPXO76031 633 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 LY6HO94772 140 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 MPIG6BO95866 241 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 GLAP06280 429 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 PSG2P11465 335 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 PRKACAP17612 351 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 MDH2P40926 338 aaKnown RBP9.42□□□□□ -0.9
TRAF4-206ENST00000454852 PDLIM4P50479 330 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 EFNB2P52799 333 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 ART1P52961 327 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 PLA2G7Q13093 441 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 ZMYND11Q15326 602 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 MICBQ29980 383 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 RAB12Q6IQ22 244 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 Q6P435 159 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 PEG10Q86TG7 708 aaKnown RBP9.42□□□□□ -0.9
TRAF4-206ENST00000454852 BIVMQ86UB2 503 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 SAMD12Q8N8I0 201 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 CHST4Q8NCG5 386 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 RAB1CQ92928 201 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 SDSLQ96GA7 329 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 TIMD4Q96H15 378 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 GAL3ST1Q99999 423 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 SELENOIQ9C0D9 397 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 MIXL1Q9H2W2 232 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 KCNK15Q9H427 330 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 SPACA1Q9HBV2 294 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRAF4-206ENST00000454852 COMMD3Q9UBI1 195 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 HSF4Q9ULV5 492 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 WIPI2Q9Y4P8 454 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 PEX16Q9Y5Y5 336 aa9.42□□□□□ -0.9
TRAF4-206ENST00000454852 TACC2O95359 2948 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 IGKV1D-17A0A075B6S4 117 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 A0A0A6YYD4 124 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 LYNX1G3V0Z9 82 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 CTDSP2O14595 271 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 LYNX1P0DP58 116 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 AMY2BP19961 511 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 CD80P33681 288 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 MNDAP41218 407 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 PAX5Q02548 391 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 PIGYQ3MUY2 71 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 SHEQ5VZ18 495 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 SIGIRRQ6IA17 410 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 ZNF788Q6ZQV5 615 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 DCDC5Q6ZRR9 648 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 CMTM4Q8IZR5 234 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 ZNF525Q8N782 197 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 OR56B1Q8NGI3 324 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 OR6Q1Q8NGQ2 317 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 C10orf105Q8TEF2 133 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 FAM46BQ96A09 425 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 BANF2Q9H503 90 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 TREM2Q9NZC2 230 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 IL36RNQ9UBH0 155 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 RABL2AQ9UBK7 228 aaPredicted RBP9.41□□□□□ -0.9
TRAF4-206ENST00000454852 DNAJB11Q9UBS4 358 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 GLS2Q9UI32 602 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 ADAM30Q9UKF2 790 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 RABL2BQ9UNT1 228 aa9.41□□□□□ -0.9
TRAF4-206ENST00000454852 NAV2Q8IVL1 2488 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 RFPL4AA6NLU0 287 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 RFPL4AL1F8VTS6 287 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 SH2D1BO14796 132 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 GEMIN2O14893 280 aaKnown RBP9.4□□□□□ -0.9
TRAF4-206ENST00000454852 SSX4O60224 188 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 HPGDSO60760 199 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 ZNF737O75373 536 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 HAND1O96004 215 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 ELK1P19419 428 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 CHATP28329 748 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 PRDX2P32119 198 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 ETV6P41212 452 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 GPR6P46095 362 aaPredicted RBP9.4□□□□□ -0.9
TRAF4-206ENST00000454852 KCNJ3P48549 501 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 TMEM50BP56557 158 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 HOXA4Q00056 320 aaPredicted RBP9.4□□□□□ -0.9
TRAF4-206ENST00000454852 ARL6IP1Q15041 203 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 TAF9Q16594 264 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 C11orf91Q3C1V1 193 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 FAM201AQ5SY85 155 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 METAP1DQ6UB28 335 aaPredicted RBP9.4□□□□□ -0.9
TRAF4-206ENST00000454852 CLEC2AQ6UVW9 174 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 ZNF561Q8N587 486 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 SPICQ8N5J4 248 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 CD177Q8N6Q3 437 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 OR10R2Q8NGX6 335 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 FAM168AQ92567 244 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 SEH1LQ96EE3 360 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 S100A16Q96FQ6 103 aaKnown RBP9.4□□□□□ -0.9
TRAF4-206ENST00000454852 PERPQ96FX8 193 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 TSC22D3Q99576 134 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 FOXC2Q99958 501 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms