RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TAGLN3Q9UI15 199 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PITPNC1Q9UKF7 332 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 POLDIP2Q9Y2S7 368 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SESN1Q9Y6P5 492 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LOC107986453A0A1B0GWG9 222 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PSMB11A5LHX3 300 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 FAM90A22PA8MWA6 464 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 E9PQ18 207 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 H0YHG0 523 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SNX3O60493 162 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 E2F6O75461 281 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CLIC3O95833 236 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CDK2P24941 298 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MPZP25189 248 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 HTR1DP28221 377 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 EPHA2P29317 976 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 DYNLT3P51808 116 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MNAT1P51948 309 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RIDAP52758 137 aaKnown RBP4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CXCR4P61073 352 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RPL23AP62750 156 aaKnown RBP4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 GNGT1P63211 74 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 DIAPH2-AS1Q14236 149 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 UBE2V2Q15819 145 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LTC4SQ16873 150 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ZNF322Q6U7Q0 402 aaPredicted RBP4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 C16orf89Q6UX73 402 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SLC35F2Q8IXU6 374 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ADGRG5Q8IZF4 528 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR14K1Q8NGZ2 314 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CAPSLQ8WWF8 208 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 DPF1Q92782 380 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MALSU1Q96EH3 234 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SPACA5Q96QH8 159 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MROQ9BYG7 248 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PPIL3Q9H2H8 161 aaKnown RBP4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RASL12Q9NYN1 266 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TVP23BQ9NYZ1 205 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ACTR3BQ9P1U1 418 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MRM2Q9UI43 246 aaKnown RBP4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR52A1Q9UKL2 312 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LINC00312Q9Y6C7 94 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 U3KQK5 164 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 V9GYS6 101 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ALMS1Q8TCU4 4167 aa4.75□□□□□ -1.65
HLA-DPA3-207ENST00000454398 IGHV3-72A0A0B4J1Y9 119 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TRAV39A0A0B4J263 110 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 A0A1W2PPE3 182 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 hADV38S2A0JD32 116 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MITFO75030 526 aaPredicted RBP4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ENTPD6O75354 484 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR2F2O95006 317 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CST1P01037 141 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RBP4P02753 201 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PRKACAP17612 351 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 AZGP1P25311 298 aaKnown RBP4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 GLP1RP43220 463 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 GLIPR1P48060 266 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 THBS3P49746 956 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 GNG10P50151 68 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 P2RX3P56373 397 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ROM1Q03395 351 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ZNF91Q05481 1191 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 AESQ08117 197 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 IL24Q13007 206 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 HNF4GQ14541 408 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 FAM98BQ52LJ0 330 aaKnown RBP4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TPTE2P1Q5T6R2 138 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MINOS1Q5TGZ0 78 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LCN1P1Q5VSP4 162 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LPCAT4Q643R3 524 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 DHFR2Q86XF0 187 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ZNF679Q8IYX0 411 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ELMOD2Q8IZ81 293 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RDH10Q8IZV5 341 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ABHD12Q8N2K0 398 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OSR2Q8N2R0 312 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 UBALD1Q8TB05 177 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RAX2Q96IS3 184 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 YIPF3Q9GZM5 350 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MAGIXQ9H6Y5 334 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LIN7BQ9HAP6 207 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ADGRL4Q9HBW9 690 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ZNF581Q9P0T4 197 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 GSTK1Q9Y2Q3 226 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 R4GMQ9 66 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MINOS1-NBL1R4GNA1 71 aa4.74□□□□□ -1.65
HLA-DPA3-207ENST00000454398 IGKV1-9A0A0C4DH69 117 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 IGKV1-12A0A0C4DH73 117 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LINC01548A6NM66 108 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 EBAG9O00559 213 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 DLGAP1O14490 977 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 NOS1APO75052 506 aaPredicted RBP4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR2H2O95918 312 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 IGKV1D-12P01611 117 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RPLP1P05386 114 aaKnown RBP4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RAP2AP10114 183 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OSMP13725 252 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 NFYBP25208 207 aa4.73□□□□□ -1.65
HLA-DPA3-207ENST00000454398 KIR3DL2P43630 455 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms