RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 C1orf87Q8N0U7 546 aa13.03□□□□□ -0.32
VCX3B-204ENST00000453306 NKAIN3Q8N8D7 197 aa13.03□□□□□ -0.32
VCX3B-204ENST00000453306 TMEM104Q8NE00 496 aa13.03□□□□□ -0.32
VCX3B-204ENST00000453306 ANGPTL6Q8NI99 470 aa13.03□□□□□ -0.32
VCX3B-204ENST00000453306 CCL13Q99616 98 aa13.03□□□□□ -0.32
VCX3B-204ENST00000453306 UQCC2Q9BRT2 126 aa13.03□□□□□ -0.32
VCX3B-204ENST00000453306 NEK6Q9HC98 313 aa13.03□□□□□ -0.32
VCX3B-204ENST00000453306 HMG20AQ9NP66 347 aa13.03□□□□□ -0.32
VCX3B-204ENST00000453306 GSTK1Q9Y2Q3 226 aa13.03□□□□□ -0.32
VCX3B-204ENST00000453306 MRPS28Q9Y2Q9 187 aaKnown RBP13.03□□□□□ -0.32
VCX3B-204ENST00000453306 POLDIP2Q9Y2S7 368 aa13.03□□□□□ -0.32
VCX3B-204ENST00000453306 V9GY05 133 aa13.03□□□□□ -0.32
VCX3B-204ENST00000453306 SVEP1Q4LDE5 3571 aa13.02□□□□□ -0.32
VCX3B-204ENST00000453306 RFPL4AA6NLU0 287 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 F5H0A9 414 aaPredicted RBP13.02□□□□□ -0.33
VCX3B-204ENST00000453306 RFPL4AL1F8VTS6 287 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 SLC17A2O00624 439 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 NXPH2O95156 264 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 RAB3BP20337 219 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 MDH2P40926 338 aaKnown RBP13.02□□□□□ -0.33
VCX3B-204ENST00000453306 SRSF2Q01130 221 aaKnown RBP13.02□□□□□ -0.33
VCX3B-204ENST00000453306 BLMHQ13867 455 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 PDCD1Q15116 288 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 P2RY14Q15391 338 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 TMEM155Q4W5P6 130 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 HES5Q5TA89 166 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 GLT8D1Q68CQ7 371 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 ELP2Q6IA86 826 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 CLVS1Q8IUQ0 354 aaPredicted RBP13.02□□□□□ -0.33
VCX3B-204ENST00000453306 FAM58AQ8N1B3 248 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 FAM192AQ9GZU8 254 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 RBM38Q9H0Z9 239 aaKnown RBP13.02□□□□□ -0.33
VCX3B-204ENST00000453306 SLITRK2Q9H156 845 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 SMURF1Q9HCE7 757 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 RASL12Q9NYN1 266 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 NLKQ9UBE8 527 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 MAB21L2Q9Y586 359 aa13.02□□□□□ -0.33
VCX3B-204ENST00000453306 TANC2Q9HCD6 1990 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 ISPDA4D126 451 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 IFITM5A6NNB3 132 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 OR2AT4A6NND4 320 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 FAM157AC9JC47 383 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 TRAPPC2LH3BP13 241 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 IGHV2-5P01817 119 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 VSIG8P0DPA2 414 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 MUC1P15941 1255 aaPredicted RBP13.01□□□□□ -0.33
VCX3B-204ENST00000453306 MYL9P24844 172 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 SNU13P55769 128 aaKnown RBP13.01□□□□□ -0.33
VCX3B-204ENST00000453306 SCGB2A2Q13296 93 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 SLC22A6Q4U2R8 563 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 ATPAF1Q5TC12 328 aaPredicted RBP13.01□□□□□ -0.33
VCX3B-204ENST00000453306 Q6P435 159 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 ZNF788Q6ZQV5 615 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 NDNFQ8TB73 568 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 TBC1D15Q8TC07 691 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 TIMD4Q96H15 378 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 GAFA1Q96PS6 74 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 BARHL1Q9BZE3 327 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 PATZ1Q9HBE1 687 aaKnown RBP13.01□□□□□ -0.33
VCX3B-204ENST00000453306 IL36GQ9NZH8 169 aa13.01□□□□□ -0.33
VCX3B-204ENST00000453306 TRAV38-1A0A0B4J264 116 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 LDLRAD4O15165 306 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 HTR3BO95264 441 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 PRKACAP17612 351 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 ZFP36P26651 326 aaKnown RBP13□□□□□ -0.33
VCX3B-204ENST00000453306 CFPP27918 469 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 HTR2CP28335 458 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 PRDX2P32119 198 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 DVL1P1P54792 670 aaPredicted RBP13□□□□□ -0.33
VCX3B-204ENST00000453306 FGF12P61328 243 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 UNC119Q13432 240 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 SPCS2Q15005 226 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 DGUOKQ16854 277 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 MICBQ29980 383 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 PIGYQ3MUY2 71 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 TIMM50Q3ZCQ8 353 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 PEG10Q86TG7 708 aaKnown RBP13□□□□□ -0.33
VCX3B-204ENST00000453306 RTN4RL2Q86UN3 420 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 TPRA1Q86W33 373 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 FAM216BQ8N7L0 139 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 OR51D1Q8NGF3 324 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 EMG1Q92979 244 aaKnown RBP13□□□□□ -0.33
VCX3B-204ENST00000453306 FOXRED1Q96CU9 486 aaPredicted RBP13□□□□□ -0.33
VCX3B-204ENST00000453306 C1orf159Q96HA4 380 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 BANF2Q9H503 90 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 ELL3Q9HB65 397 aaPredicted RBP13□□□□□ -0.33
VCX3B-204ENST00000453306 MALRD1Q5VYJ5 2156 aa13□□□□□ -0.33
VCX3B-204ENST00000453306 A0A0A6YYD4 124 aa12.99□□□□□ -0.33
VCX3B-204ENST00000453306 TMEM82A0PJX8 343 aa12.99□□□□□ -0.33
VCX3B-204ENST00000453306 NOTOA8MTQ0 251 aa12.99□□□□□ -0.33
VCX3B-204ENST00000453306 TMEM14DPA8MWL7 114 aa12.99□□□□□ -0.33
VCX3B-204ENST00000453306 B4DSR2 109 aa12.99□□□□□ -0.33
VCX3B-204ENST00000453306 KNG1P01042 644 aa12.99□□□□□ -0.33
VCX3B-204ENST00000453306 ZNF146Q15072 292 aa12.99□□□□□ -0.33
VCX3B-204ENST00000453306 RSU1Q15404 277 aa12.99□□□□□ -0.33
VCX3B-204ENST00000453306 C2orf76Q3KRA6 126 aa12.99□□□□□ -0.33
VCX3B-204ENST00000453306 AWAT2Q6E213 333 aa12.99□□□□□ -0.33
VCX3B-204ENST00000453306 DCDC5Q6ZRR9 648 aa12.99□□□□□ -0.33
VCX3B-204ENST00000453306 GLCCI1Q86VQ1 547 aa12.99□□□□□ -0.33
VCX3B-204ENST00000453306 OR51T1Q8NGJ9 327 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms